EY720727

Overview
NameEY720727
Unique NameEY720727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length264
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MDLB_BUCAI (Multidrug resistance-like ATP-binding protein mdlB OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mdlB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 3
Query:   12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +G+ + +GE G  LS GQ+Q +AIARVL+    +LILDEAT+ +DS  E  IQ++L ++ +  T+I IAHRLSTI   D ++VL
Sbjct:  465 KGIYSLLGEEGNNLSVGQKQLLAIARVLVAYPKVLILDEATANIDSGTEQLIQKTLLSIRKNCTLIIIAHRLSTIIEADSIIVL 548          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: CYDC_BACSU (ATP-binding/permease protein cydC OS=Bacillus subtilis GN=cydC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GL+  +GE G  LSGGQ QR+A+AR  L + PIL+LDE T+ LD E E  I+E++  L + K V    HRL  +  MD ++VL
Sbjct:  452 GLEGRIGEGGRALSGGQAQRVALARAFLGNRPILLLDEPTAHLDIETEYEIKETMLDLFEDKLVFLATHRLHWMLDMDEIIVL 534          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLDA V + G   S GQRQ + I R LLK A I++LDEA+S++D   +A IQE++       TV+ IAHRL TIA  D+++VL
Sbjct: 1469 GLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDALIQETIRTKFADCTVLTIAHRLGTIADSDKIMVL 1551          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLD+ V E G   S GQRQ + +AR LL+D  IL+LDEAT+++D   ++ IQ ++       T++ IAHRL+TI   DR++VL
Sbjct: 1187 GLDSKVTENGDNWSVGQRQLLCLARALLRDPKILVLDEATASVDGHSDSLIQATIREKFSNCTILTIAHRLNTIMDSDRIIVL 1269          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLDA V E G   S GQRQ ++++R LL+ + IL+LDEAT+A+D   +A IQ+++    +  T++ IAHRL+TI   D+++VL
Sbjct: 1367 GLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDKILVL 1449          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.633e-13
Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            LD  + E G  LS GQRQ + +AR LL  + IL+LDEAT+++D E +  IQ+++    + +T++ IAHR+ T+   D+++VL
Sbjct: 1445 LDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVL 1526          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: ABCCA_DICDI (ABC transporter C family member 10 OS=Dictyostelium discoideum GN=abcC10 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.633e-13
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLD+ V E G   S GQRQ I +AR LL+   IL+LDEAT+++D + ++ IQ ++       T++ IAHRL+TI   DR++VL
Sbjct: 1178 GLDSKVTENGENFSVGQRQLIVLARALLRKPKILVLDEATASVDGQSDSLIQATIRNKFSNCTILTIAHRLNTIMDSDRIMVL 1260          

HSP 2 Score: 68.9366 bits (167), Expect = 8.959e-12
Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEV-EAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +G    +GERG+ LSGGQ+QR++IAR +  DA + ILD+  SA+DS V +    +  + ++  KTVI +A++L+ +   D  VVL
Sbjct:  536 QGDSVEIGERGINLSGGQKQRVSIARAVYSDADVYILDDPLSAVDSHVGKHLFHKCFKGILSSKTVILVANQLNYLPFADNTVVL 620          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: TAGB_DICDI (Serine protease/ABC transporter B family protein tagB OS=Dictyostelium discoideum GN=tagB PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.132e-13
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 3
Query:   21 DAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            D  +GE G  LSGGQ++RIA+AR +     I++LDE T+ LD E E AI +S++ L QG TV+ +AH+++ +   D++ VL
Sbjct: 1650 DTQIGEAG-NLSGGQKKRIAVARAICAKRKIMLLDEITAELDPESEEAITQSIKVLTQGHTVVMVAHKVAAVRDCDKIFVL 1729          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB26B_ARATH (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABCB26 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.132e-13
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:   51 LSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEAL----MQGKTVIAIAHRLSTIARMDRLVVL 263
            LSGGQ+QRIAIAR +L+D  ILILDEATSALD+E E  ++  L ++       ++VI IAHRLSTI   DR+V +
Sbjct:  593 LSGGQKQRIAIARAILRDPRILILDEATSALDAESEHNVKGVLRSIGNDSATKRSVIVIAHRLSTIQAADRIVAM 667          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.132e-13
Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLDA V E G   S GQRQ +++AR LL+ + IL+LDEAT+A+D   +  IQ+++    +  T++ IAHRL+TI   D+++VL
Sbjct: 1362 GLDAEVTEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRLNTIIDCDKVLVL 1444          
The following BLAST results are available for this feature:
BLAST of EY720727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
MDLB_BUCAI7.329e-1448.81Multidrug resistance-like ATP-binding protein mdlB... [more]
CYDC_BACSU7.329e-1446.99ATP-binding/permease protein cydC OS=Bacillus subt... [more]
ABCC8_DICDI7.329e-1449.40ABC transporter C family member 8 OS=Dictyostelium... [more]
ABCC3_DICDI7.329e-1445.78ABC transporter C family member 3 OS=Dictyostelium... [more]
AB2C_ARATH7.329e-1445.78ABC transporter C family member 2 OS=Arabidopsis t... [more]
BPT1_YEAST1.633e-1341.46Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
ABCCA_DICDI1.633e-1345.78ABC transporter C family member 10 OS=Dictyosteliu... [more]
TAGB_DICDI2.132e-1344.44Serine protease/ABC transporter B family protein t... [more]
AB26B_ARATH2.132e-1356.00ABC transporter B family member 26, chloroplastic ... [more]
AB1C_ARATH2.132e-1345.78ABC transporter C family member 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-E06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720727 ID=EY720727; Name=EY720727; organism=Citrus sinensis; type=EST; length=264bp
GCGACGGCCGCCGCGGCCTGGACGCCCACGTCGGCGAGCGCGGCGTCAAG
CTGTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGTGCTGCTCAA
GGACGCGCCCATCCTGATCCTGGACGAGGCCACGTCGGCGCTCGACTCCG
AGGTCGAGGCCGCGATCCAGGAGAGCCTGGAGGCGCTGATGCAGGGCAAG
ACCGTCATCGCCATCGCGCACCGCCTGTCCACCATCGCCCGCATGGACCG
GCTGGTGGTGCTGG
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