EY720727

Overview
NameEY720727
Unique NameEY720727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length264
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: TAGC_DICDI (Serine protease/ABC transporter B family protein tagC OS=Dictyostelium discoideum GN=tagC PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.785e-13
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 3
Query:   21 DAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            D  +G  G  LSGGQ++RIAIAR +     I++LDE T+ LD E E AI +S++ L QG TV+ +AH+++ +   D++ VL
Sbjct: 1580 DTVLGSAGSLLSGGQKKRIAIARAICAKRKIMLLDEITAELDPESEEAITQSIKVLTQGHTVVMVAHKVAAVRDCDKIFVL 1660          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.785e-13
Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            LD+ V E G   S GQRQ + + RVLLK + +LILDEAT+++D+  +  IQE+L     G TVI IAHR+S++   D +++L
Sbjct: 1367 LDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLL 1448          

HSP 2 Score: 67.0106 bits (162), Expect = 3.404e-11
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 3
Query:   30 VGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAI-QESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +GERG+ LSGGQ+QRI IAR L +DA I + D+  SA+D+   + + +E L  L++ KTVI + H+L  +   D ++V+
Sbjct:  742 IGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRNKTVIYVTHQLEFLPEADLILVM 820          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: STE6_YEAST (Alpha-factor-transporting ATPase OS=Saccharomyces cerevisiae GN=STE6 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GL+  +G  GV LSGGQ+QR+AIAR  ++D PIL LDEA SALD      + +++    +GKT I + H LS I   D L ++
Sbjct:  494 GLETLIGTGGVTLSGGQQQRVAIARAFIRDTPILFLDEAVSALDIVHRNLLMKAIRHWRKGKTTIILTHELSQIESDDYLYLM 576          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP9_HUMAN (Multidrug resistance-associated protein 9 OS=Homo sapiens GN=ABCC12 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 33/82 (40.24%), Postives = 57/82 (69.51%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            L A V E G   S G+RQ + +AR LL+++ I++LDEAT+++DS+ +  +Q +++   +G TV+ IAHRL+T+   D ++V+
Sbjct: 1246 LQAEVTENGENFSVGERQLLCVARALLRNSKIILLDEATASMDSKTDTLVQNTIKDAFKGCTVLTIAHRLNTVLNCDHVLVM 1327          

HSP 2 Score: 68.5514 bits (166), Expect = 1.170e-11
Identity = 31/79 (39.24%), Postives = 54/79 (68.35%), Query Frame = 3
Query:   30 VGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEV-EAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +GERG+ LSGGQRQRI++AR +  D  + +LD+  SA+D+ V +   +E ++  ++GKTV+ + H+L  +   D +++L
Sbjct:  596 IGERGLNLSGGQRQRISLARAVYSDRQLYLLDDPLSAVDAHVGKHVFEECIKKTLRGKTVVLVTHQLQFLESCDEVILL 674          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP5_RAT (Multidrug resistance-associated protein 5 OS=Rattus norvegicus GN=Abcc5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            L++ V E G   S G+RQ + IAR LL+   ILILDEAT+A+D+E +  IQE++       T++ IAHRL T+   DR++VL
Sbjct: 1318 LESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVL 1399          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP5_MOUSE (Multidrug resistance-associated protein 5 OS=Mus musculus GN=Abcc5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            L++ V E G   S G+RQ + IAR LL+   ILILDEAT+A+D+E +  IQE++       T++ IAHRL T+   DR++VL
Sbjct: 1318 LESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVL 1399          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP5_HUMAN (Multidrug resistance-associated protein 5 OS=Homo sapiens GN=ABCC5 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            L++ V E G   S G+RQ + IAR LL+   ILILDEAT+A+D+E +  IQE++       T++ IAHRL T+   DR++VL
Sbjct: 1319 LESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVL 1400          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP3_RAT (Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus GN=Abcc3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.750e-13
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLD    E G  LS GQRQ + +AR LL+ + +L+LDEAT+A+D E +  IQ ++    +  TV+ IAHRL+TI   +R++VL
Sbjct: 1409 GLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVL 1491          

HSP 2 Score: 68.9366 bits (167), Expect = 8.959e-12
Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESL---EALMQGKTVIAIAHRLSTIARMDRLVVL 263
            G    +GE+G+ LSGGQRQR+++AR +  DA I +LD+  SA+DS V   I + +   E ++ GKT + + H +S + + D ++VL
Sbjct:  737 GDQTEIGEKGINLSGGQRQRVSLARAVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVL 822          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.750e-13
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLD    E G  LS GQRQ + +AR LL+ + +L+LDEAT+A+D E +  IQ ++    +  TV+ IAHRL+TI   +R++VL
Sbjct: 1410 GLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVL 1492          

HSP 2 Score: 68.9366 bits (167), Expect = 8.959e-12
Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESL---EALMQGKTVIAIAHRLSTIARMDRLVVL 263
            G    +GE+G+ LSGGQRQR+++AR +  DA I +LD+  SA+DS V   I + +   E ++ GKT + + H +S + + D ++VL
Sbjct:  738 GDQTEIGEKGINLSGGQRQRVSLARAVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVL 823          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.750e-13
Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLDA V E G   S GQRQ +++AR LL+ + IL+LDEAT+++D   ++ IQ ++    +  T++ IAHRL+TI   D+++VL
Sbjct: 1360 GLDAEVCEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVL 1442          
The following BLAST results are available for this feature:
BLAST of EY720727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
TAGC_DICDI2.785e-1344.44Serine protease/ABC transporter B family protein t... [more]
AB7C_ARATH2.785e-1346.34ABC transporter C family member 7 OS=Arabidopsis t... [more]
STE6_YEAST3.637e-1345.78Alpha-factor-transporting ATPase OS=Saccharomyces ... [more]
MRP9_HUMAN3.637e-1340.24Multidrug resistance-associated protein 9 OS=Homo ... [more]
MRP5_RAT3.637e-1346.34Multidrug resistance-associated protein 5 OS=Rattu... [more]
MRP5_MOUSE3.637e-1346.34Multidrug resistance-associated protein 5 OS=Mus m... [more]
MRP5_HUMAN3.637e-1346.34Multidrug resistance-associated protein 5 OS=Homo ... [more]
MRP3_RAT4.750e-1345.78Canalicular multispecific organic anion transporte... [more]
MRP3_MOUSE4.750e-1345.78Canalicular multispecific organic anion transporte... [more]
AB12C_ARATH4.750e-1344.58ABC transporter C family member 12 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-E06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720727 ID=EY720727; Name=EY720727; organism=Citrus sinensis; type=EST; length=264bp
GCGACGGCCGCCGCGGCCTGGACGCCCACGTCGGCGAGCGCGGCGTCAAG
CTGTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGTGCTGCTCAA
GGACGCGCCCATCCTGATCCTGGACGAGGCCACGTCGGCGCTCGACTCCG
AGGTCGAGGCCGCGATCCAGGAGAGCCTGGAGGCGCTGATGCAGGGCAAG
ACCGTCATCGCCATCGCGCACCGCCTGTCCACCATCGCCCGCATGGACCG
GCTGGTGGTGCTGG
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