EY720727

Overview
NameEY720727
Unique NameEY720727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length264
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: Y015_MYCGE (Putative ABC transporter ATP-binding protein MG015 OS=Mycoplasma genitalium GN=MG015 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.204e-13
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 3
Query:   12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +G D ++  +   LS G+RQ + IAR ++++AP+L+LDEATS++D   E  IQES+  LM+ KT   I+HRLS I     ++V+
Sbjct:  476 KGYDTYISNKADYLSVGERQLLTIARAVIRNAPVLLLDEATSSVDVHSEKLIQESIGRLMKNKTSFIISHRLSIIRDATLIMVI 559          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: LAGD_LACLA (Lactococcin-G-processing and transport ATP-binding protein lagD OS=Lactococcus lactis subsp. lactis GN=lagD PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.204e-13
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 3
Query:   21 DAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            D+ + E G  LSGGQ+QR+AIAR +L D+ I+I DEATS LD+ +E  I E L  L Q KT+I IAH LS     D ++VL
Sbjct:  597 DSVLEEGGNNLSGGQKQRLAIARAILNDSEIIIFDEATSGLDTLLEKEILEYLIKL-QDKTIIFIAHHLSIAKACDEIIVL 676          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.204e-13
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLD++V E G   S GQRQ + +AR LLK + IL LDE T+ +D    + +  ++ +  +G TVI IAHR+ST+  +D +++L
Sbjct: 1082 GLDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTISSECKGVTVITIAHRISTVVDLDSILIL 1164          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.204e-13
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLDA V E G   S GQRQ +++AR LL+ + IL LDEAT+++D   ++ IQ ++    +  T++ IAHRL+TI   D+++VL
Sbjct: 1360 GLDAEVSEGGENFSVGQRQLLSLARALLRRSKILFLDEATASVDVRTDSLIQRTIREEFKSCTMLIIAHRLNTIIDCDKILVL 1442          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13
Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            L + + E G  LS GQRQ + +AR LL+   I++LDEAT+++D   +A IQE++    QG T++ IAHRL ++   D+++V+
Sbjct: 1528 LSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHRLRSVIDYDKILVM 1609          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP3_HUMAN (Canalicular multispecific organic anion transporter 2 OS=Homo sapiens GN=ABCC3 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            GLD    E G  LS GQRQ + +AR LL+ + IL+LDEAT+A+D E +  IQ ++       TV+ IAHRL+TI    R++VL
Sbjct: 1414 GLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLIQATIRTQFDTCTVLTIAHRLNTIMDYTRVLVL 1496          

HSP 2 Score: 68.9366 bits (167), Expect = 8.959e-12
Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESL---EALMQGKTVIAIAHRLSTIARMDRLVVL 263
            G    +GE+G+ LSGGQRQR+++AR +  DA I +LD+  SA+DS V   I + +   E ++ GKT + + H +S + + D ++VL
Sbjct:  739 GDQTEIGEKGINLSGGQRQRVSLARAVYSDADIFLLDDPLSAVDSHVAKHIFDHVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVL 824          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MDLA_BUCAI (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mdlA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 3
Query:   21 DAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGK-TVIAIAHRLSTIARMDRLVVL 263
            +  VGERGV LSGGQ+QR+ IAR LL +A ILILD+A SA+D++ E  I +++    + K ++I   HRLS +   D ++V+
Sbjct:  463 ETQVGERGVMLSGGQKQRVCIARALLLNAEILILDDALSAVDAQTENNILKNINEWKKKKHSLIITTHRLSALINSDEIIVI 544          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: CYDC_HAEIN (ATP-binding/permease protein cydC OS=Haemophilus influenzae GN=cydC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13
Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 3
Query:   12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +GL+  +G+ G  LSGG+++R+ +AR+LL +A IL+LDE T  LD E E  I   +    + KT+I + HRLS+I + D++ V+
Sbjct:  464 KGLNLWLGDGGRPLSGGEQRRLGLARILLNNASILLLDEPTEGLDRETERQILRLILQHAENKTLIIVTHRLSSIEQFDKICVI 547          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            LDA V E G   S GQRQ + + RVLLK + IL+LDEAT+++DS  +  IQ+ +    + +TV+ IAHR+ T+   D ++VL
Sbjct: 1365 LDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVL 1446          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            LDA V E G   S GQRQ + + RVLLK + IL+LDEAT+++DS  +  IQ+ +    + +TV+ IAHR+ T+   D ++VL
Sbjct:  912 LDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVL 993          
The following BLAST results are available for this feature:
BLAST of EY720727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
Y015_MYCGE6.204e-1342.86Putative ABC transporter ATP-binding protein MG015... [more]
LAGD_LACLA6.204e-1351.85Lactococcin-G-processing and transport ATP-binding... [more]
AB13C_ARATH6.204e-1342.17ABC transporter C family member 13 OS=Arabidopsis ... [more]
AB11C_ARATH6.204e-1344.58ABC transporter C family member 11 OS=Arabidopsis ... [more]
YBT1_YEAST8.103e-1341.46ATP-dependent bile acid permease OS=Saccharomyces ... [more]
MRP3_HUMAN8.103e-1346.99Canalicular multispecific organic anion transporte... [more]
MDLA_BUCAI8.103e-1346.34Multidrug resistance-like ATP-binding protein mdlA... [more]
CYDC_HAEIN8.103e-1341.67ATP-binding/permease protein cydC OS=Haemophilus i... [more]
AB9C_ARATH8.103e-1345.12ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB15C_ARATH8.103e-1345.12Putative ABC transporter C family member 15 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-E06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720727 ID=EY720727; Name=EY720727; organism=Citrus sinensis; type=EST; length=264bp
GCGACGGCCGCCGCGGCCTGGACGCCCACGTCGGCGAGCGCGGCGTCAAG
CTGTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGTGCTGCTCAA
GGACGCGCCCATCCTGATCCTGGACGAGGCCACGTCGGCGCTCGACTCCG
AGGTCGAGGCCGCGATCCAGGAGAGCCTGGAGGCGCTGATGCAGGGCAAG
ACCGTCATCGCCATCGCGCACCGCCTGTCCACCATCGCCCGCATGGACCG
GCTGGTGGTGCTGG
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