EY720727

Overview
NameEY720727
Unique NameEY720727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length264
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: HST6_CANAL (Alpha-factor-transporting ATPase OS=Candida albicans GN=HST6 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            LD ++    + LSGGQ+QRI+IAR  LK++P+LI+DE+ SALD+E +  + E ++    GKT I I H    I   + +++L
Sbjct:  501 LDLNMKVNHLTLSGGQQQRISIARAYLKNSPVLIMDESFSALDTETKQGLIEKVKKWRIGKTTIFITHEYKNILDDENVIIL 582          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11
Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            LD+ V + G   S GQRQ + + RV+LK + +L LDEAT+++DS+ +A IQ+ +       T+I+IAHR+ T+   DR++V+
Sbjct: 1400 LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHRIPTVMDGDRVLVI 1481          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: TAP1_GORGO (Antigen peptide transporter 1 OS=Gorilla gorilla gorilla GN=TAP1 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.446e-11
Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 3
Query:   12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDS----EVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +G D  VGE G +LSGGQRQ +A+AR L++   +LILD+ATSALD+    +VE  + ES E     ++V+ I   LS + + D ++ L
Sbjct:  630 QGYDTEVGEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPE--RYSRSVLLITQHLSLVEQADHILFL 715          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.446e-11
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3
Query:   30 VGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAI-QESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +GERG+ LSGGQ+QRI++AR L  ++   ILDE  SA+D EV   +    ++ +M  KT I I H+L  I   D +VV+
Sbjct:  585 IGERGINLSGGQKQRISLARALYANSDCYILDEPLSAVDPEVATHLFNHCIQGMMNDKTRILITHQLQFIPSADHIVVV 663          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: VMR1_YEAST (ABC transporter ATP-binding protein/permease VMR1 OS=Saccharomyces cerevisiae GN=VMR1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            L   + E G+ LS G+RQ + IAR LL++  I++LDEATS++D + +  IQ  + +     T++ IAHRL ++   DR++V+
Sbjct: 1464 LHTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSDHLIQGIIRSEFNKSTILTIAHRLRSVIDYDRIIVM 1545          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: CVAB_ECOLX (Colicin V secretion/processing ATP-binding protein cvaB OS=Escherichia coli GN=cvaB PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLV 257
            G +  +GE G  LSGGQ+QRI IAR L +   IL +DEATSALDSE E  +  +++ +    T + IAHR +T+  +DR++
Sbjct:  618 GYETLIGELGEGLSGGQKQRIFIARALYRKPGILFMDEATSALDSESEHFVNVAIKNM--NITRVIIAHRETTLRTVDRVI 696          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 3
Query:   30 VGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAI-QESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +GERG+ LSGGQ+QRI++AR L  ++   ILDE  SA+D EV   +    ++ +M  KT I + H+L  I   D +VV+
Sbjct:  588 IGERGINLSGGQKQRISLARALYANSDCYILDEPLSAVDPEVATHLFNHCIQGMMNDKTRILVTHQLQFIPSADHIVVV 666          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.584e-11
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 3
Query:   30 VGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAI-QESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +GERG+ LS G + RI +AR L  D+   ILDE  S++D E+   I Q  ++ +M+GKTVI + H++  I+  D +VV+
Sbjct:  661 IGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVV 739          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MRP4_HUMAN (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 3
Query:   18 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263
            +D  + E G   S GQRQ + +AR +L+   ILI+DEAT+ +D   +  IQ+ +       TV+ IAHRL+TI   D+++VL
Sbjct: 1166 MDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVL 1247          
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MCHF_ECOLX (Probable microcin-H47 secretion/processing ATP-binding protein mchF OS=Escherichia coli GN=mchF PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLV 257
            G +  +GE G  LSGGQ+QRI IAR L +   IL +DEATS+LD+E E  +  +++ +    T + IAHR +T+  +DR++
Sbjct:  618 GYETLIGELGEGLSGGQKQRIFIARALYRKPGILFMDEATSSLDTESERFVNAAIKKM--NITRVIIAHRETTLRTVDRII 696          
The following BLAST results are available for this feature:
BLAST of EY720727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
HST6_CANAL3.404e-1141.46Alpha-factor-transporting ATPase OS=Candida albica... [more]
AB4C_ARATH3.404e-1141.46ABC transporter C family member 4 OS=Arabidopsis t... [more]
TAP1_GORGO4.446e-1143.18Antigen peptide transporter 1 OS=Gorilla gorilla g... [more]
ABCC1_DICDI4.446e-1144.30ABC transporter C family member 1 OS=Dictyostelium... [more]
VMR1_YEAST5.807e-1139.02ABC transporter ATP-binding protein/permease VMR1 ... [more]
CVAB_ECOLX5.807e-1145.68Colicin V secretion/processing ATP-binding protein... [more]
ABCCD_DICDI5.807e-1143.04ABC transporter C family member 13 OS=Dictyosteliu... [more]
ABCCF_DICDI7.584e-1141.77ABC transporter C family member 15 OS=Dictyosteliu... [more]
MRP4_HUMAN9.905e-1140.24Multidrug resistance-associated protein 4 OS=Homo ... [more]
MCHF_ECOLX9.905e-1143.21Probable microcin-H47 secretion/processing ATP-bin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-E06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720727 ID=EY720727; Name=EY720727; organism=Citrus sinensis; type=EST; length=264bp
GCGACGGCCGCCGCGGCCTGGACGCCCACGTCGGCGAGCGCGGCGTCAAG
CTGTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGTGCTGCTCAA
GGACGCGCCCATCCTGATCCTGGACGAGGCCACGTCGGCGCTCGACTCCG
AGGTCGAGGCCGCGATCCAGGAGAGCCTGGAGGCGCTGATGCAGGGCAAG
ACCGTCATCGCCATCGCGCACCGCCTGTCCACCATCGCCCGCATGGACCG
GCTGGTGGTGCTGG
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