CX674727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 3.587e-65 Identity = 121/151 (80.13%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+LSKNGV+FGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSI AIW QVVLMG +EGYR+ GAFDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL DHIADPVANNAWA+ATNFVPGK Sbjct: 114 PELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.044e-64 Identity = 120/151 (79.47%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYRI G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 56 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.044e-64 Identity = 120/151 (79.47%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYRI G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 105 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.780e-64 Identity = 121/150 (80.67%), Postives = 128/150 (85.33%), Query Frame = -2 Query: 170 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 619 PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSI AIW CQVVLMG VEGYRI G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPG Sbjct: 112 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.966e-64 Identity = 118/151 (78.15%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI AIW CQV+LMG VEGYRI G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK Sbjct: 124 PELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 6.765e-64 Identity = 118/151 (78.15%), Postives = 127/151 (84.11%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSI AIW CQV+LMG +EGYR+ G FDPLGLADDPD FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK Sbjct: 128 PELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.154e-63 Identity = 117/151 (77.48%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYRI G+FDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.154e-63 Identity = 115/151 (76.16%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG +EGYR+ G+FDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPGK Sbjct: 117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.154e-63 Identity = 116/151 (76.82%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.154e-63 Identity = 116/151 (76.82%), Postives = 127/151 (84.11%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNP+L+HAQSI AIW CQV+LMG VEGYR+ G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGPIENL DH+ADP NNAWAYATNF PGK Sbjct: 115 PELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265 The following BLAST results are available for this feature:
BLAST of CX674727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674727 ID=CX674727; Name=CX674727; organism=Citrus sinensis; type=EST; length=620bpback to top |