CX674727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 5.727e-63 Identity = 114/151 (75.50%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQA+VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 5.727e-63 Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+ ++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 117 PELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 7.479e-63 Identity = 115/151 (76.16%), Postives = 128/151 (84.77%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQV+LMG VEGYRI G+FDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPGK Sbjct: 117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 7.479e-63 Identity = 118/151 (78.15%), Postives = 126/151 (83.44%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSI AIW CQVVLMG VEGYRI G+FDPLGLADDP+ F ELKVKELK GR AM SMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 9.768e-63 Identity = 116/151 (76.82%), Postives = 128/151 (84.77%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW QV+LMG VEGYRI G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK Sbjct: 118 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 9.768e-63 Identity = 118/151 (78.15%), Postives = 127/151 (84.11%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSI AIW QV+LMG VEGYRI G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH+A PV NNAWAYATNFVPGK Sbjct: 113 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 9.768e-63 Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFK G+QIFS+GGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 117 PELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62 Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLA+DP+ FAELKVK +KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.712e-62 Identity = 113/151 (74.83%), Postives = 127/151 (84.11%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+ ++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLADDP+ FAEL+VKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 116 PELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.080e-61 Identity = 115/150 (76.67%), Postives = 125/150 (83.33%), Query Frame = -2 Query: 170 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 619 PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLADDPD FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYA PG Sbjct: 118 PELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267 The following BLAST results are available for this feature:
BLAST of CX674727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674727 ID=CX674727; Name=CX674727; organism=Citrus sinensis; type=EST; length=620bpback to top |