CX674727

Overview
NameCX674727
Unique NameCX674727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 5.727e-63
Identity = 114/151 (75.50%), Postives = 129/151 (85.43%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+               G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQA+VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  116 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 5.727e-63
Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+ ++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+               G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  117 PELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.479e-63
Identity = 115/151 (76.16%), Postives = 128/151 (84.77%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQV+LMG VEGYRI               G+FDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPGK
Sbjct:  117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.479e-63
Identity = 118/151 (78.15%), Postives = 126/151 (83.44%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSI AIW CQVVLMG VEGYRI               G+FDPLGLADDP+ F ELKVKELK GR AM SMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct:  115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 9.768e-63
Identity = 116/151 (76.82%), Postives = 128/151 (84.77%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW  QV+LMG VEGYRI               G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct:  118 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 9.768e-63
Identity = 118/151 (78.15%), Postives = 127/151 (84.11%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSI AIW  QV+LMG VEGYRI               G+FDPLGLADDP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH+A PV NNAWAYATNFVPGK
Sbjct:  113 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 9.768e-63
Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+L++NGVKFGEAVWFK G+QIFS+GGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+               G+FDPLGLA+DP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  117 PELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62
Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+               G+FDPLGLA+DP+ FAELKVK +KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  117 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.712e-62
Identity = 113/151 (74.83%), Postives = 127/151 (84.11%), Query Frame = -2
Query:  167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619
            PE+ ++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+               G+FDPLGLADDP+ FAEL+VKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  116 PELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266          
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.080e-61
Identity = 115/150 (76.67%), Postives = 125/150 (83.33%), Query Frame = -2
Query:  170 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 619
            PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI AIW CQVVLMG VEGYR+               G+FDPLGLADDPD FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYA    PG
Sbjct:  118 PELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267          
The following BLAST results are available for this feature:
BLAST of CX674727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB25_NICPL5.727e-6375.50Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB23_PETSP5.727e-6375.50Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB2A_SPIOL7.479e-6376.16Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_MAIZE7.479e-6378.15Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB28_PEA9.768e-6376.82Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB23_SOYBN9.768e-6378.15Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB23_NICPL9.768e-6375.50Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB25_TOBAC1.276e-6275.50Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB21_PETSP3.712e-6274.83Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB2_PHYPA1.080e-6176.67Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_8C11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-8C11-F22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674727 ID=CX674727; Name=CX674727; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTTTTTTTGGAAATAAAAGATCAGGAGCATAGCATTTCTAA
TGGTAACATTACAGAGCTACTAATAAGTCCATGACAGAGTTTTCCACAAA
AGCACATACGATACATAGAATAATGTTACAGCTGAAAAAGACACCATCAA
GTCATGAGTTTCTTTACTTTCCGGGAACAAAGTTAGTGGCATAAGCCCAG
GCATTGTTGGCCACAGGATCAGCAATGTGGTCGTAGAGGTTCTCAATTGG
ACCCTTCCCAGTGACAATAGCCTGAACAAAGAATCCAAACATGGAGAACA
TAGCCCGACGGCCATTCTTGAGCTCCTTGACCTTCAACTCAGCAAATTGA
TCGGGGTCATCAGCCAAACCAAGTGGGTCAAAAGCACCACCAGGGTAAAG
TGGGTCAAGTCCTTCACCAAGAGGACCGCCACCAATTCTGTATCCTTCAA
CAAAACCCATAAGCACAACCTGGCAGGGCCAGATAGCCCAAATGCTCTGA
GCATGAATGAGGTTGGGGTTGCCAAGATAGTCAAGGCCACCTTCAGAGAA
TATTTGAGCGCCAGCCTTGAACCAAACTGCTTCGCCGAACTTCACTCCAT
TCTTGGAGAGGATTTCAGGG
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