CX674727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.406e-61 Identity = 113/151 (74.83%), Postives = 126/151 (83.44%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFK G+QIFSEGGL YLGNP+L+HAQSI AIW CQVVLMG VEGYR+ G+FDPLGLADD + FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 114 PELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 5.360e-61 Identity = 112/151 (74.17%), Postives = 128/151 (84.77%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI +IW QV+LMG VEGYR+ G+FDPLGLA+DP++ AELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 114 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.000e-61 Identity = 114/151 (75.50%), Postives = 126/151 (83.44%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW QV+LMG VEGYRI G+FDPLGLA+ P+ FAELKVKELKNGR AMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 78 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.560e-60 Identity = 114/151 (75.50%), Postives = 124/151 (82.12%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSI AIW QV+LMG VEGYRI G+FDPLGLADDP+ AELKVKELKNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYAT PGK Sbjct: 106 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.037e-60 Identity = 111/151 (73.51%), Postives = 124/151 (82.12%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGE VWFKAG+QIFSEGGL + GNP+L+HAQSI AIW CQVVLMG VEGY + G+FDPLGL DDP++FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL DH+ DPV NNAWAYATNFVPGK Sbjct: 114 PELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.474e-60 Identity = 114/152 (75.00%), Postives = 127/152 (83.55%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXG-AFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HAQSI AIW QV+LMG VEGYR+ G +FDPLGLA DP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.474e-60 Identity = 113/151 (74.83%), Postives = 125/151 (82.78%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEA WFKAG+QIFSEGGLDYLGN +LIHAQSI AIW QV+LMG VEGYRI G+FDPL LADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+A+PV NNAWAYATNFVPGK Sbjct: 95 PELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.474e-60 Identity = 114/152 (75.00%), Postives = 127/152 (83.55%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXG-AFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HAQSI AIW QV+LMG VEGYR+ G +FDPLGLA DP+ FAELKVKELKNGR AMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 4.538e-60 Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXG-AFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSI AIW QV+LMG VEGYR+ G +FDPLGLA DP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 7.740e-60 Identity = 109/151 (72.19%), Postives = 124/151 (82.12%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+ ++NGVKFGEAVW KAG+QIFSEGGLDYLGNP+L+HAQSI AIW CQV+LMG VEGYR+ G+FDPLGLA+DP+ FAELKVKE KNGR AMFSMFGFF+QAIVTGKGP+ENL DH+ DPV NNAW+YATNFVP K Sbjct: 117 PELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267 The following BLAST results are available for this feature:
BLAST of CX674727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674727 ID=CX674727; Name=CX674727; organism=Citrus sinensis; type=EST; length=620bpback to top |