CX043302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++ EGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++ EGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++ EGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++ EGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++ EGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.328e-12 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = -2 Query: 180 LAVLQFSKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 341 LAVL++ K+D++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: RS37_YEAST (40S ribosomal protein S31 OS=Saccharomyces cerevisiae GN=UBI3 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -2 Query: 195 LAVLQFSKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTY 341 LAVL + KVD GKV +LR+EC N CGAG F+ANH DR YCGKC Y Sbjct: 24 LAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 72
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +DTI+ +K +I++ EGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 20 TDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.454e-11 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D I +K ++++ EGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG Sbjct: 20 TDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGG 76
BLAST of CX043302 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11 Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 408 SDTIDNVKAKIQDTEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA 581 +D + +K ++++ EGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG+ Sbjct: 20 NDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGGS 77 The following BLAST results are available for this feature:
BLAST of CX043302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043302 ID=CX043302; Name=CX043302; organism=Citrus sinensis; type=EST; length=585bpback to top |