CX043301

Overview
NameCX043301
Unique NameCX043301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043301 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.450e-79
Identity = 147/258 (56.98%), Postives = 187/258 (72.48%), Query Frame = 3
Query:   51 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQXXXXXXEAPD 818
            TRV S+R+R+ +TLSAHRNE+++LLSR   +GKGILQ H LI E ++I  E+     L  G FG+++ + QEAIVLPP+VA+AVRPRPGVWEY+RVNV            YL FKEELV+G SN N +LELD EPFNASFPRPT S SIGNGV+FLNRHLS+ +F +K+ + PLL+FLRVH +KG  +MLNDRIQ+++ LQ  L KAE++L+ + P+T +SE     Q  G ERGWGDTA R LEM+       +APD
Sbjct:    8 TRVPSIRDRVQDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNILGEDHATLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVEGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKLAPDTLYSEFEYELQGTGFERGWGDTAARVLEMMHLLLDILQAPD 265          
BLAST of CX043301 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.557e-65
Identity = 122/201 (60.70%), Postives = 148/201 (73.63%), Query Frame = 3
Query:  216 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQXXXXXXEAPD 818
            L++G F EVLR+ QEAIV+PP+VA+AVRPRPGVWEY+RVNV            YLHFKEELVDG ++ ++VLELDFEPFN S PRPT S SIGNGV+FLNRHLS+ +F +K+ + PLL+FLRVH HKG  MMLNDRIQ +  LQ  L KAE+YL  +  +TP+SE     Q +G ERGWGDTAER LEM+       +APD
Sbjct:    7 LSDGPFSEVLRSAQEAIVVPPFVAIAVRPRPGVWEYVRVNVSELNVEQLTVSEYLHFKEELVDGKADDHYVLELDFEPFNESVPRPTRSSSIGNGVQFLNRHLSSSMFCNKDCLEPLLDFLRVHKHKGVVMMLNDRIQTIQRLQSALSKAEDYLIKLPADTPYSEFEFVIQGMGFERGWGDTAERVLEMMHLLLDILQAPD 207          
BLAST of CX043301 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.557e-65
Identity = 131/234 (55.98%), Postives = 166/234 (70.94%), Query Frame = 3
Query:  123 LSRIEGKGKGILQNHQLIAEF-ESISEENR-KHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQXXXXXXEAPD 818
            L R   +GKGILQ+HQLI EF +++  +   + L +  F +VL   QEAIVLPP+VALA+RPRPGV EY+RVNV+           YL FKEELV+G +NG+++LELDFEPFNA+ PRPT S SIGNGV+FLNRHLS+ +F +KESM PLLEFLR H H G+ MMLNDRIQN+  LQ  L +AEE+L+ +   TP+SE     Q +G ERGWGDTA++  EM+       +APD
Sbjct:   29 LVRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNKSPFMKVL---QEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEELVNGHANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEFLRTHKHDGRPMMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQKVSEMVHLLLDILQAPD 259          
The following BLAST results are available for this feature:
BLAST of CX043301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_PEA1.450e-7956.98Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU1.557e-6560.70Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS2_ARATH1.557e-6555.98Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10B08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10B08-D16-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043301 ID=CX043301; Name=CX043301; organism=Citrus sinensis; type=EST; length=820bp
CGTCCTTGAAGTTTTTGTTTGTCTGAGAATCAATGGCCGAACGTGCTTTG
ACCCGCGTTCACAGTCTCCGCGAGCGTTTGGATGAGACTCTCTCTGCCCA
CAGGAATGAAATCTTGGCCCTTTTGTCAAGGATTGAGGGCAAGGGCAAAG
GAATCTTGCAAAACCATCAACTTATTGCTGAGTTTGAATCAATTTCTGAG
GAAAACAGAAAGCATCTAACTGAGGGTGCATTTGGTGAAGTTCTAAGAGC
CACCCAGGAAGCAATTGTTTTGCCTCCGTGGGTAGCGCTTGCCGTGCGTC
CAAGGCCCGGTGTGTGGGAGTACATCCGAGTGAATGTCCATGCCCTTGTC
GTTGAGGAGCTGCTTGTAGCCGAGTACCTGCACTTCAAGGAGGAACTTGT
CGATGGAGGCTCCAATGGCAACTTCGTGCTTGAGTTGGATTTTGAGCCAT
TCAATGCCTCGTTCCCTCGCCCAACTCTTTCAAAGTCTATTGGAAATGGT
GTGGAATTCCTTAACCGCCACCTTTCTGCGAAGCTCTTCCATGACAAGGA
GAGCATGCATCCACTGCTTGAATTTCTCCGCGTCCACTGCCACAAGGGCA
AAAACATGATGCTGAATGACAGAATTCAGAACTTGAATTCTCTTCAACAT
GTTCTGAGGAAGGCAGAGGAGTATCTGACCACAGTGGTACCAGAAACGCC
ATTCTCTGAGTTGGCACTAAGATTTCAGGAGATTGGTTTGGAGAGAGGTT
GGGGTGATACTGCTGAGCGTGCACTTGAGATGATTCAGCTTCTTTTGGAT
CTTCTTGAGGCACCTGATCC
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