EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.199e-18
Identity = 51/108 (47.22%), Postives = 64/108 (59.26%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI T    YM KYDS HG++ + E+K ++   L+   K V  +  R+P  IPW ETGA+YVV+STGVFT               VIISAPS DAPM+ + VNE  Y
Sbjct:   35 DPFIETKYAAYMLKYDSTHGIF-NGEIK-QEGNDLVINGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAPSADAPMYVMVVNEKSY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.872e-18
Identity = 51/110 (46.36%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI      YM KYDS HG +K  ++K  D   L    K +     ++P  IPW+ETGA YVV+STGVFT               V+ISAPS DAPMF +GVN   YKP
Sbjct:   34 DPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETYKP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.872e-18
Identity = 50/109 (45.87%), Postives = 62/109 (56.88%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI T    YM KYDS HG ++   ++  D   ++ G+K +  F  R+P  IPW   GA Y+V+STGVFT               VIISAPS DAPMF +GVN  EYK
Sbjct:   35 DPFIETHYAAYMLKYDSTHGRFQG-TIETYDEGLIVNGKK-IRFFAERDPAAIPWGSAGAAYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNKEYK 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.872e-18
Identity = 52/110 (47.27%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI T    YM KYDS HG +K       +   L    K VT +  R+P  IPW + G EYVV+STGVFT               VIISAPS DAPMF +GVNE  Y P
Sbjct:   34 DPFIETHYAAYMLKYDSTHGQFKG--TIDVNSNGLTVNGKAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.751e-18
Identity = 52/118 (44.07%), Postives = 64/118 (54.24%), Query Frame = 1
Query:   16 PDSGSTPRPDPFITTDLLTYMFKYDSVHGLWKHH-ELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            PD       DPFI      YM KYDS HG++K   ++   D   L+   K V  +  R+P  IPW +TGAEY+V+STGVFT               VIISAPS DAPM+ +GVNE  Y
Sbjct:   25 PDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFKGTIQVSGSD---LIVNGKTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.751e-18
Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  +  +YMFKYDS HG +      + + + ++   K + V+  R+P  IPW + G +YV+DSTGVF                V+I+APS  APMF VGVNE++Y P
Sbjct:   34 DPFIAPEYASYMFKYDSTHGRYSGEV--SHEGENIVIDGKKIRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.751e-18
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YM KYDS HG +K       +   L+ G K V  +  R+P  IPW+ETGA+Y+V+STGVFT               VIISAPS DAPM+ +GVNE  Y
Sbjct:   34 DPFIEPHYAAYMLKYDSQHGNFKGDV--TVEGSDLVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMYVMGVNEKTY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.751e-18
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKT--LLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDS HG +K     + +++   L+     ++V+  + P +IPW   G+ YVV+STGV+                V+ISAPS DAPMF +GVNEN+Y P
Sbjct:  106 DPFIDPEYMVYMFKYDSTHGRYKG----SVEFRNGQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP 213          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.899e-18
Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDS HG +K +    K    L+     ++VF  + P EIPW   G+ +VV++TGV+                V+I APS DAPMF +GVNE EY P
Sbjct:   93 DPFIDLEYMVYMFKYDSTHGRYKGNVEHKKGQ--LVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVYLSLEETKAHIEAGAQRVVICAPSPDAPMFVMGVNEKEYNP 200          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.398e-18
Identity = 49/109 (44.95%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKT-LLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI T    YM KYDS HG +K      + Y+  L+   K +  F  R+P  IPW  TGA+Y+V+STGVFT               V+ISAPS DAPMF +GVN   Y
Sbjct:   34 DPFIETHYAAYMLKYDSTHGQFKG---TIETYEEGLIVNGKKIRFFAERDPAAIPWGTTGADYIVESTGVFTTQEKAAAHLKGGAKKVVISAPSADAPMFVMGVNNTSY 139          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P_COLGL2.199e-1847.22Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_COCHE2.872e-1846.36Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_ASPOR2.872e-1845.87Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_AJECA2.872e-1847.27Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_PODAN3.751e-1844.07Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P_PICCI3.751e-1840.91Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_CRYPA3.751e-1846.30Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3PT_HUMAN3.751e-1841.07Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PT_BOVIN4.899e-1841.82Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P_ASPNG6.398e-1844.95Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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