EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.320e-14
Identity = 44/104 (42.31%), Postives = 56/104 (53.85%), Query Frame = 1
Query:   61 DLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFGVGVNENEYK 369
            D L YM KYDSVHG +      + D  TL+   K + +  V++P E+ W E GA+ VV+STG+F                VI+SAPSK D PMF  GVN   YK
Sbjct:   40 DYLAYMLKYDSVHGRFDGEV--SVDGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYK 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.782e-13
Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 1
Query:   73 YMFKYDSVHGLWKHHELK-------AKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFGVGVNENEYKP 372
            Y  KYDSVHG +KH           AKD   ++ G + + V   RNP ++PW + G EYV++STG+FT               V+ISAP S  A  F +GVN N Y P
Sbjct:   48 YQMKYDSVHGKFKHSVSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNP 155          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.633e-13
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   67 LTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFGVGVNENEY 366
            L Y+FKYDS HG +    + AK+ + ++  ++ +  F  RNP ++PW + GA+YVV+STG+FT               VIISAPSKD    P F VGVN   Y
Sbjct:   40 LAYLFKYDSTHGSYGG-TVVAKE-EGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 44/110 (40.00%), Postives = 57/110 (51.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPF   + + YM KYD+VHG +      ++D  T+  G K ++VF    P EIPW +T  + V++ TG FT               VIISAPS DAPMF  G N   Y P
Sbjct:   34 DPFTDCEYMEYMLKYDTVHGRFDGTIAHSEDSITVN-GNK-ISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAPSADAPMFVCGCNLETYDP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.355e-12
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 1
Query:   70 TYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFGVGVNENEY 366
            T++ KYDS+ G +K  ++K  D +T     KP+ V   R+P ++PWAE G + V++ TGVF                VII+AP+K  D P + VGVNE +Y
Sbjct:  126 THLLKYDSILGTFKA-DVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDY 225          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 2.355e-12
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 1
Query:   52 ITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFG---VGVNENEYKP 372
            +  D L Y+ KYDS HG  +  +++AKD   ++ G   +    VRNP E+PW + GA+YVV+STG+FT               VIISAP+KD        VGVN + + P
Sbjct:   37 VPPDNLAYLLKYDSTHGKLRS-QVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 1
Query:   67 LTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGV-GVNENEYKP 372
            L ++ KYDSVHG++K   ++AKD   ++ G K + VF  ++P +IPW + G + V+++TGVF                VII+AP+K+  +  V GVNE +Y P
Sbjct:   41 LAHLLKYDSVHGIFKG-SVEAKDDSIVVDG-KEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12
Identity = 42/110 (38.18%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   52 ITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFG---VGVNENEYKP 372
            +  D L Y+ KYDS HG  +  +++ KD   ++ G   +    VRNP E+PW + GA+YVV+STG+FT               VIISAP+KD        VGVN + + P
Sbjct:   37 VPPDNLAYLLKYDSTHGRLRS-QVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   70 TYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFGVGVNENEY 366
            +++ KYDS+ G +K  E+K  + +T+    KP+ V   R+P ++PWAE G + V++ TGVF                VII+AP+K  D P + +GVNE +Y
Sbjct:  127 SHLLKYDSMLGTFKA-EVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVIGVNEQDY 226          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PG_TRYCR (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.526e-11
Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 1
Query:   61 DLLTYMFKYDSVHGLWKHHELK-------AKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFGVGVNENEYKP 372
            +   Y  +YD+VHG +K+           AKD   ++ G + + V   RNP ++PW + G EYV++STG+FT               V+ISAP S  A    +GVN +EY P
Sbjct:   44 EYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNP 155          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P_RALSO7.320e-1442.31Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3PG_TRYBB2.782e-1339.81Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P1_SYNY33.633e-1341.75Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]
G3P1_GIALA6.197e-1340.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giar... [more]
G3PB_SPIOL2.355e-1238.61Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3P1_ANAVT2.355e-1239.09Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_AQUAE6.851e-1237.86Glyceraldehyde-3-phosphate dehydrogenase OS=Aquife... [more]
G3P1_ANASP6.851e-1238.18Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3PB_PEA8.948e-1236.63Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PG_TRYCR1.526e-1134.82Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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