CX674615

Overview
NameCX674615
Unique NameCX674615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA_ACISJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidovorax sp. (strain JS42) GN=hemL PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.938e-29
Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = -2
Query:    1 GALLIFDEVMTGFRLAYGGAQEYF-----GVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 462
            GALL+ DEVMTGFR+A GGAQ  +     G  PD           +P+ A+GG R +ME +AP GP+YQAGTLSGNP+A   G+ TL+ + +PG Y+ L   T  L  G+  A   AG  +CG    GMFGFF       N+ +   ++  +F   + G
Sbjct:  235 GALLVIDEVMTGFRVALGGAQSLYAQAIPGFKPDITVLGKVIGGGMPLAAFGGSRAVMEQLAPLGPVYQAGTLSGNPVATACGLATLREIAKPGFYDALGARTRALIDGLAGAASAAGVPLCGDTQGGMFGFFLLPQLPQNYPEVLNTDGMRFNTLFHG 393          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA_ANADE (Glutamate-1-semialdehyde 2,1-aminomutase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=hemL PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.837e-29
Identity = 68/155 (43.87%), Postives = 90/155 (58.06%), Query Frame = -2
Query:    7 KRMGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 471
            K+ GAL I DEVMTGFRL+ GGA   +G+ PD           LPVGA+GGRRD+M+ VAPAGP+YQAGTLSGNP+AM AG H   +L     Y  L  ++  L  G+  A  +A   +    +  M   FF+  PV++   A+   T +F  F+
Sbjct:  230 KKHGALFIVDEVMTGFRLSSGGACGLYGLRPDLVTFGKVIGAGLPVGAFGGRRDVMDRVAPAGPIYQAGTLSGNPMAMAAG-HAALKLMTEAAYRKLETLSAALADGLSAAAAEAKVPVQVNRVGSMLTVFFSHKPVFDAATARACNTRRFGAFF 383          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA_ALHEH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=hemL PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.837e-29
Identity = 66/153 (43.14%), Postives = 91/153 (59.48%), Query Frame = -2
Query:    7 GALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT-EGPVYNFEDAKKSETTKFARFY 462
            G++LIFDEVMTGFR+    AQ  +G+TPD           +PVGA+GG+  IM  +AP GP+YQAGTLSGNP+AM AG+ TL  + +P T+  L + T  L  G+ +  + AG ++       MFG FFT + PV  FE  +  +   F  F+
Sbjct:  231 GSVLIFDEVMTGFRVGVQCAQGRYGITPDLTCLGKVIGGGMPVGAFGGKAQIMADLAPEGPVYQAGTLSGNPVAMAAGLATLALVDDPATHRALEEATATLVDGLRERAEAAGVSVSLNQAGSMFGLFFTDQNPVTTFEQVQACDLEAFKVFF 383          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA_DIAST (Glutamate-1-semialdehyde 2,1-aminomutase OS=Diaphorobacter sp. (strain TPSY) GN=hemL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.011e-29
Identity = 66/159 (41.51%), Postives = 88/159 (55.35%), Query Frame = -2
Query:    1 GALLIFDEVMTGFRLAYGGAQEYF-----GVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 462
            GALL+ DEVMTGFR+A GGAQ  +     G  PD           +P+ A+GG R +ME +AP GP+YQAGTLSGNP+A   G+ TL+ + +PG Y+ L   T  L  G+  A   AG   CG    GMFGFF       N+ +   ++  +F   + G
Sbjct:  235 GALLVIDEVMTGFRVALGGAQSLYAQAIPGFKPDITVLGKVIGGGMPLAAFGGSRAVMEQLAPLGPVYQAGTLSGNPVATACGLATLREIAKPGFYDALGARTRALIDGLAGAASAAGVPFCGDTQGGMFGFFLLPQLPQNYPEVLNTDGMRFNTLFHG 393          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA_CLOBB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=hemL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.544e-29
Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = -2
Query:    4 GALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE-GPVYNFEDAKKSETTKFARFYR 462
            GALLIFDEVMTGFR+A+ GAQ  F + PD           LP GAY G+++IME ++P G +YQAGT+SGNP+ M+AG+ TL +LK     Y+++ KI  +L +G+I   K+    +    + GM   FFTE   V  +ED K  +  +F R+++
Sbjct:  230 GALLIFDEVMTGFRVAFKGAQTLFDIKPDLITYAKIMGGGLPCGAYAGKKEIMEKLSPCGGVYQAGTMSGNPVVMSAGLATLTKLKNNIELYDHVEKIGEKLQEGLIKISKENDVPLIINRVGGMLTLFFTELEKVNTYEDVKTCDNERFKRYFK 384          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA_CAMLR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=hemL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.544e-29
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = -2
Query:    7 KRMGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 471
            K+   LLIFDEVM+GFR +Y G+   + +  D           +P  A+  R +IM++++P G +YQAGTLSGNPLAM +G  +LK+ +   G YE L K+   LTQG+ +A       +    +  MFGFFF E PV N++DA KS+T  FA+F+
Sbjct:  227 KKHQILLIFDEVMSGFRASYLGSYGIYNIQADIVTFGKVIGGGMPAAAFAARAEIMDLLSPLGGVYQAGTLSGNPLAMASGYASLKKARNYEGLYEKLEKLGKRLTQGLKEAANDCKIPLQVNCVGSMFGFFFCENPVNNYQDALKSDTKLFAKFH 382          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA2_STAAW (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain MW2) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.547e-29
Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = -2
Query:    4 GALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 462
            G L+I+DEV+T FR  YG AQ+  GV PD           LP+G YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + S+   F +F++
Sbjct:  234 GTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFK 386          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA2_STAAT (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.547e-29
Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = -2
Query:    4 GALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 462
            G L+I+DEV+T FR  YG AQ+  GV PD           LP+G YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + S+   F +F++
Sbjct:  234 GTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFK 386          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA2_STAAS (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain MSSA476) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.547e-29
Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = -2
Query:    4 GALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 462
            G L+I+DEV+T FR  YG AQ+  GV PD           LP+G YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + S+   F +F++
Sbjct:  234 GTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFK 386          
BLAST of CX674615 vs. ExPASy Swiss-Prot
Match: GSA2_STAAR (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain MRSA252) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.547e-29
Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = -2
Query:    4 GALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 462
            G L+I+DEV+T FR  YG AQ+  GV PD           LP+G YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + S+   F +F++
Sbjct:  234 GTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFK 386          
The following BLAST results are available for this feature:
BLAST of CX674615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ACISJ2.938e-2941.51Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidov... [more]
GSA_ANADE3.837e-2943.87Glutamate-1-semialdehyde 2,1-aminomutase OS=Anaero... [more]
GSA_ALHEH3.837e-2943.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Alkali... [more]
GSA_DIAST5.011e-2941.51Glutamate-1-semialdehyde 2,1-aminomutase OS=Diapho... [more]
GSA_CLOBB6.544e-2943.23Glutamate-1-semialdehyde 2,1-aminomutase OS=Clostr... [more]
GSA_CAMLR6.544e-2942.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Campyl... [more]
GSA2_STAAW8.547e-2941.18Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAT8.547e-2941.18Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAS8.547e-2941.18Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAR8.547e-2941.18Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_7F03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-7F03-L5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674615 ID=CX674615; Name=CX674615; organism=Citrus sinensis; type=EST; length=472bp
TCCCCTGTAAAATCTTGCAAACTTTGTGGTTTCACTCTTCTTTGCATCCT
CAAAGTTGTAAACAGGCCCTTCGGTAAAGAAAAATCCAAACATCCCACTT
ATATACCCTCCACAAATGGCATGCCCAGCTTTCTTTCCAGCATCAATGAT
GCCTTGAGTAAGTTCACCTGTGATCTTATTCAAGTATTCATAAGTTCCTG
GCTCCTTCAATCGTTTAAGGGTGTGTATCCCAGCGGTCATTGCCAATGGA
TTCCCACTTAAGGTCCCAGCCTGGTACATTGGGCCTGCCGGTGCCACCAT
CTCCATGATATCCCTTCTTCCTCCATAAGCACCAACTGGCAGCCCACCTC
CAATGATTTTACCAAGAGTTGTCAAATCAGGAGTTACCCCAAAATATTCC
TGAGCTCCACCATAAGCTAAACGAAATCCAGTCATGACTTCATCAAAGAT
CAGGAGAGCACCCATTCTCTTT
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