CX043300

Overview
NameCX043300
Unique NameCX043300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 3.914e-80
Identity = 138/192 (71.88%), Postives = 162/192 (84.38%), Query Frame = -3
Query:  233 ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 808
            +S+D EE AE++KM+SLI+QY L+G+FRWI++QMNR RNGELYRYI DTKG FVQPA YEAFGLTVVE+MTC LPTFATC GGPAEII NG SG+HIDPYH +Q A  LV FFE C  +P++W KIS GGLKRI E+YTWK YS+RLLTL GVY FWKHVS L+R E+RRYLEMFY+LK+R LA S+PLA +
Sbjct:  612 QSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 8.720e-80
Identity = 137/191 (71.73%), Postives = 165/191 (86.39%), Query Frame = -3
Query:  239 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 811
            K+S D EE  E++KM+ L+ QY LNG+FRWI++Q NR RNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEII +G SG+HIDPYH +QA+E+LVDFF++CK DP++W+K+S GGL+RI E+YTWKIYS+RL+TL GVY FWK+VS L+R E+RRYLEMFY LK+R LA SVP+A
Sbjct:  617 KKSSDREEIEEIEKMHDLMKQYNLNGEFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.249e-78
Identity = 137/193 (70.98%), Postives = 160/193 (82.90%), Query Frame = -3
Query:  233 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 811
            K+S D EE AE++KM+ LI +Y L GQFRWI+SQ NRVRNGELYRYICD  G F QPA YEAFGLTVVEAMTCGLPTFATC GGPAEII +G SG+HIDPYH +Q AE + +FF KC+ DP+YW KIS GGL RI+E+YTW+ YS+RL+TL GVYGFWK+VS L+R E+RRYLEMFY LK+R LA SVPLA +
Sbjct:  560 KKSNDREEIAEIEKMHRLIQEYNLRGQFRWIASQTNRVRNGELYRYICDKGGIFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVKCREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATD 751          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.485e-59
Identity = 118/190 (62.11%), Postives = 138/190 (72.63%), Query Frame = -3
Query:  269 VGGDRRKESKD---LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKY 829
            V GD  KESKD    EEQ   KKMYSLID YK  G  R IS+QMNRVRNGELY+YICDTKGAFVQPA YEAF L                   P EII +G SG HIDPYH ++ A+ILV+FF+KC ADPSYWD+IS GG +RI EKYTWK+YS+RL+TLTG YGFW +VS L+R ++ RY++MFYAL+Y
Sbjct:   31 VAGDHGKESKDRDEAEEQGGFKKMYSLIDDYKFKGHIRLISAQMNRVRNGELYQYICDTKGAFVQPA-YEAFRLDCDRVHEVRSAKDRDLPWRPCEIIADGVSGLHIDPYHSDKDADILVNFFDKCNADPSYWDEISQGG-QRIYEKYTWKLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15
Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            LIDQY L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  AD   W K    GLK I   Y+W  +S+  L+
Sbjct:  534 LIDQYDLYGQVAY-PKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALL----KLVADKQLWTKCQQNGLKNI-HLYSWPEHSKTYLS 660          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +II    +G  IDP+  +  A+ L+    K  AD   W K    GLK I   ++W  + +  L+
Sbjct:  544 LIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALL----KLVADKHLWTKCRQNGLKNI-HLFSWPEHCKNYLS 670          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13
Identity = 48/133 (36.09%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            LID+Y L G   +     N+    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I   Y+W  + +  LT
Sbjct:  549 LIDKYDLYGSVAF-PKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALL----KLVADKNLWQECRRNGLRNI-HLYSWPEHCRTYLT 675          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 51/143 (35.66%), Postives = 70/143 (48.95%), Query Frame = -3
Query:  368 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 784
            A +  +  +ID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP H +QA   + D   K  AD   W K    GLK I   ++W    K Y  R+
Sbjct:  526 ALLLSILKMIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLVDP-HDQQA---IADALLKLVADKQLWAKCRANGLKNI-HLFSWPEHCKTYLSRI 662          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  563 LIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  563 LIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
The following BLAST results are available for this feature:
BLAST of CX043300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUS2_ARATH3.914e-8071.88Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_PEA8.720e-8071.73Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU6.249e-7870.98Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUSY_SACOF8.485e-5962.11Sucrose synthase (Fragment) OS=Saccharum officinar... [more]
SPS_BETVU9.822e-1538.35Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SPIOL1.086e-1336.84Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS_MAIZE1.418e-1336.09Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS_SOLTU9.193e-1335.66Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS_ORYSJ2.675e-1235.34Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI2.675e-1235.34Probable sucrose-phosphate synthase OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10B08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10B08-D16-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043300 ID=CX043300; Name=CX043300; organism=Citrus sinensis; type=EST; length=831bp
TTTTTTTTTTTTTTTTTAGTCACAAACTATAATGGAATTGATGAGGGTGC
AACACCCAAAGTACAAACAATGCTGAGAAATGCAAAAAGGAAAAAAAAAA
TTGAAAAAAGAAAATTTAAGCCGGTAAAAAAGTCTTTGTCCAATCGCAAT
CCCAGAAGGGACATTATTCTCCACAACTCGAGAAATCTCCACTCGGACCA
ACCACCCTGAGAGCTTCCTCAATGTCCATTTACTCCACAGCCAGAGGAAC
AGATTCAGCCAGCTTACGGTACTTGAGAGCATAAAACATTTCAAGGTATC
GACGGCTCTCAAGCCGATCAAGGTTAGATACATGTTTCCAGAACCCATAG
ACTCCAGTCAGGGTCAGAAGCCTCTGAGAGTAAATTTTCCATGTATACTT
CTCTTCAATACGCTTCAGGCCACCCAGTGATATCTTGTCCCAGTATGAGG
GATCTGCCTTGCACTTCTCAAAGAAGTCAACAAGGATCTCAGCAGCCTGC
TCACCATGGTAAGGATCAATGTGGTAGCCAGATTTCCCGTTAACGATAAT
CTCAGCGGGGCCACCCTTGCAAGTTGCAAATGTTGGCAATCCACAGGTCA
TGGCCTCAACAACAGTCAAGCCAAAGGCCTCATACAGTGCAGGTTGCACA
AAAGCTCCCTTTGTATCACAAATGTACCGGTACAATTCACCGTTCCTGAC
CCGATTCATCTGAGAAGAGATCCATCGGAACTGGCCATTCAATTTGTATT
GATCAATGAGGGAATACATCTTCTTCATTTCAGCCTGTTCTTCCAAGTCC
TTGGACTCCTTTCTCCTATCACCACCCACTA
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