CX043300

Overview
NameCX043300
Unique NameCX043300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:1972..2808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  ++ + W++    GLK I   ++W  + +  LT
Sbjct:  557 LIDRYDLYGQVAF-PKHHKQSDVPEIYRLASKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALL----KLVSEKNLWNECRKNGLKNI-HLFSWPEHCRTYLT 683          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.493e-12
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = -3
Query:  335 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRLLTLTGVYGFWK 760
            LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  IDP+  +  A+ L+    K  ++   W K    GLK I   ++W    K Y  ++ T    +  W+
Sbjct:  537 LIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADALL----KLVSNKQLWAKCRQNGLKNI-HLFSWPEHCKTYLSKIATCKPRHPQWQ 676          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12
Identity = 48/135 (35.56%), Postives = 66/135 (48.89%), Query Frame = -3
Query:  368 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 760
            LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A+ L+    K  A    W +    GLK I   ++W    K Y  R+
Sbjct:  536 LIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL----KLVAGKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664          
BLAST of CX043300 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 45/133 (33.83%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  362 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 760
            +ID+Y L G   +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP++ E  A+ L+    K  A+   W K    GLK I   ++W  + +  L+
Sbjct:  535 MIDKYDLYGLVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALL----KLVAEKHLWAKCRANGLKNI-HLFSWPEHCKSYLS 661          
The following BLAST results are available for this feature:
BLAST of CX043300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SPS2_CRAPL2.675e-1234.59Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS_VICFA3.493e-1233.56Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS1_CITUN7.782e-1235.56Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS1_CRAPL1.016e-1133.83Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10B08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10B08-D16-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043300 ID=CX043300; Name=CX043300; organism=Citrus sinensis; type=EST; length=831bp
TTTTTTTTTTTTTTTTTAGTCACAAACTATAATGGAATTGATGAGGGTGC
AACACCCAAAGTACAAACAATGCTGAGAAATGCAAAAAGGAAAAAAAAAA
TTGAAAAAAGAAAATTTAAGCCGGTAAAAAAGTCTTTGTCCAATCGCAAT
CCCAGAAGGGACATTATTCTCCACAACTCGAGAAATCTCCACTCGGACCA
ACCACCCTGAGAGCTTCCTCAATGTCCATTTACTCCACAGCCAGAGGAAC
AGATTCAGCCAGCTTACGGTACTTGAGAGCATAAAACATTTCAAGGTATC
GACGGCTCTCAAGCCGATCAAGGTTAGATACATGTTTCCAGAACCCATAG
ACTCCAGTCAGGGTCAGAAGCCTCTGAGAGTAAATTTTCCATGTATACTT
CTCTTCAATACGCTTCAGGCCACCCAGTGATATCTTGTCCCAGTATGAGG
GATCTGCCTTGCACTTCTCAAAGAAGTCAACAAGGATCTCAGCAGCCTGC
TCACCATGGTAAGGATCAATGTGGTAGCCAGATTTCCCGTTAACGATAAT
CTCAGCGGGGCCACCCTTGCAAGTTGCAAATGTTGGCAATCCACAGGTCA
TGGCCTCAACAACAGTCAAGCCAAAGGCCTCATACAGTGCAGGTTGCACA
AAAGCTCCCTTTGTATCACAAATGTACCGGTACAATTCACCGTTCCTGAC
CCGATTCATCTGAGAAGAGATCCATCGGAACTGGCCATTCAATTTGTATT
GATCAATGAGGGAATACATCTTCTTCATTTCAGCCTGTTCTTCCAAGTCC
TTGGACTCCTTTCTCCTATCACCACCCACTA
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