CV886758

Overview
NameCV886758
Unique NameCV886758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_YERPB (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.725e-44
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_YERPA (Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.725e-44
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_YERP3 (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.725e-44
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: ALTA7_ALTAL (Minor allergen Alt a 7 OS=Alternaria alternata GN=ALTA7 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.725e-44
Identity = 102/194 (52.58%), Postives = 127/194 (65.46%), Query Frame = -2
Query:  248 MATKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK-SDVPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMF-EMEKVKGGSPYGAGTF-AGDGSRQPTELELEQAFHQGK 817
            MA K+ IVYYSMYGH++K+A+   KG     G +AKL+QV ETLP+EVL KM APPK S VP++  P  L E DG +FG PTR+G   AQFK F D TG  W+     GK AG+F            TA+T+++ LV HG I+VP+GY     M   +++V GGSP+GAGTF AGDGSRQP+ELEL  A  QGK
Sbjct:    1 MAPKIAIVYYSMYGHIKKMADAELKGIQEAGG-DAKLFQVAETLPQEVLDKMYAPPKDSSVPVLEDPAVLEEFDGILFGIPTRYGNFPAQFKTFWDKTGKQWQQGAFWGKYAGVFVSTGTLGGGQETTAITSMSTLVDHGFIYVPLGYKTAFSMLANLDEVHGGSPWGAGTFSAGDGSRQPSELELNIAQAQGK 193          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_DESMR (Flavoprotein wrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 98/201 (48.76%), Postives = 125/201 (62.19%), Query Frame = -2
Query:  218 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 805
            V IVYYS+YGHV  +A+ + +G   V G+ A L +VPETL EEV+GKM A       S VP  T  EL +AD  VFG PTRFG M  Q + FLDATG +W    L GKP G+F            T ++ I  L+HHGMI V + Y+F AG   +++V GGSPYGA T A GDGSR P+E EL+ A  QG+HIA + ++L+
Sbjct:    3 VLIVYYSLYGHVAAMAQAVAEGVHQVPGMTATLRRVPETLSEEVIGKMGATEAQKALSHVPACTLEELEDADAIVFGTPTRFGNMCGQMRQFLDATGQIWMRGGLVGKPGGVFCSTATQHGGQETTLMSFIQTLLHHGMIVVGLPYSF-AGQMRLDEVTGGSPYGATTIAGGDGSRMPSENELDAARFQGRHIADVTRRLR 202          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SHIFL (Flavoprotein wrbA OS=Shigella flexneri GN=wrbA PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SHIF8 (Flavoprotein wrbA OS=Shigella flexneri serotype 5b (strain 8401) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECOUT (Flavoprotein wrbA OS=Escherichia coli (strain UTI89 / UPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECOSM (Flavoprotein wrbA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECOSE (Flavoprotein wrbA OS=Escherichia coli (strain SE11) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
The following BLAST results are available for this feature:
BLAST of CV886758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_YERPB4.725e-4447.24Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
WRBA_YERPA4.725e-4447.24Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (... [more]
WRBA_YERP34.725e-4447.24Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
ALTA7_ALTAL4.725e-4452.58Minor allergen Alt a 7 OS=Alternaria alternata GN=... [more]
WRBA_DESMR6.171e-4448.76Flavoprotein wrbA OS=Desulfovibrio magneticus (str... [more]
WRBA_SHIFL1.053e-4346.23Flavoprotein wrbA OS=Shigella flexneri GN=wrbA PE=... [more]
WRBA_SHIF81.053e-4346.23Flavoprotein wrbA OS=Shigella flexneri serotype 5b... [more]
WRBA_ECOUT1.053e-4346.23Flavoprotein wrbA OS=Escherichia coli (strain UTI8... [more]
WRBA_ECOSM1.053e-4346.23Flavoprotein wrbA OS=Escherichia coli (strain SMS-... [more]
WRBA_ECOSE1.053e-4346.23Flavoprotein wrbA OS=Escherichia coli (strain SE11... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886758 ID=CV886758; Name=CV886758; organism=Citrus sinensis; type=EST; length=857bp
ATTTATGTAAGAAGAAGTACAAATAATCAACCAAGCAACTTTTTATCATG
AAGAAAAGCCACTATATGACACACGCACAAAGCTTATACTGATAACAAAG
CAAGAATTTATTGTTTGCAAACCAGAAGATATAGGAAACCGGGAATTCTA
GAGACGAAAAGAATGGAATAAGTCCACCTAATGGTTGTATTGTAAATTGA
AATATTTAAGCACTTCCCTTCAGCTTCTTTGCAATGCCCGCAATGTGTTT
TCCCTGGTGGAAAGCTTGCTCCAACTCAAGCTCAGTTGGCTGTCTCGAGC
CATCTCCAGCAAAAGTTCCTGCACCGTAGGGACTTCCACCTTTCACTTTC
TCCATCTCAAACATGCCAGCACCAAATGTGTATCCAATAGGAACAAATAT
CATCCCATGGTGAACAAGCTGAGTAATTGCCGTCAACGCTGTAGTCTCTT
GTCCACCACCTTGTGACCCAGTGCTGTAGAACATCCCAGCAGGTTTGCCA
GCGAGCTGTTGTGTCCTCCATAGACCACCAGTAGCATCTAAAAATGCTTT
AAATTGAGCAGCCATCATTCCAAATCTTGTTGGGAAGCCAAAAACAAACC
CATCAGCCTCAGCAAGTTCGTTGGGGGTAATAATAGGTACATCACTCTTT
GGTGGTGCACTCATCTTACCAAGTACCTCCTCAGGTAGTGTCTCAGGGAC
CTGCCATAATTTGGCTTCAACACCCTCAACAGATGAAGCTCCTTTCTTTA
TCTCTTCTGCCAGTTTCTCTACATGTCCATACATGGAATAGTACACAATA
TACACTTTGGTTGCCATCTCTTAAGGAGTCTTCTTCGACGAGTCTCTGTT
ACTTCCT
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