CV886758

Overview
NameCV886758
Unique NameCV886758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECO7I (Flavoprotein wrbA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECO55 (Flavoprotein wrbA OS=Escherichia coli (strain 55989 / EAEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECO45 (Flavoprotein wrbA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECO27 (Flavoprotein wrbA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ECO24 (Flavoprotein wrbA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SALTY (Flavoprotein wrbA OS=Salmonella typhimurium GN=wrbA PE=3 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 1.375e-43
Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +           T  +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGSLYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SALPC (Flavoprotein wrbA OS=Salmonella paratyphi C (strain RKS4594) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.375e-43
Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +           T  +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGSLYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_GEOMG (Flavoprotein wrbA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.375e-43
Identity = 101/203 (49.75%), Postives = 126/203 (62.07%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA--PPKS--DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV I +YSMYGH+ ++AE + +G   V G EA L +VPETLP +VL KM A  P K+   +P+ T +ELA AD  +FG PTRFG M  Q + FLDATGGLW    L GK  G+F            T LT  T L+H GM+ V + Y F AG   ++++ GGSPYGA T A G G R P+E EL  A +QGK+IA IA KLKG
Sbjct:    2 KVLIPFYSMYGHIYRMAEAVAEGVREVSGAEAVLRRVPETLPTDVLQKMGAVEPQKAFAHIPVCTVDELAAADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGGLVGKAGGVFTSSATQHGGQESTILTFHTFLLHQGMVLVGLPYAF-AGQMRIDEITGGSPYGASTIAGGQGERLPSENELAGARYQGKYIAEIAAKLKG 203          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ESCF3 (Flavoprotein wrbA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.375e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVIVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SALSV (Flavoprotein wrbA OS=Salmonella schwarzengrund (strain CVM19633) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.795e-43
Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +           T  +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
The following BLAST results are available for this feature:
BLAST of CV886758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_ECO7I1.053e-4346.23Flavoprotein wrbA OS=Escherichia coli O7:K1 (strai... [more]
WRBA_ECO551.053e-4346.23Flavoprotein wrbA OS=Escherichia coli (strain 5598... [more]
WRBA_ECO451.053e-4346.23Flavoprotein wrbA OS=Escherichia coli O45:K1 (stra... [more]
WRBA_ECO271.053e-4346.23Flavoprotein wrbA OS=Escherichia coli O127:H6 (str... [more]
WRBA_ECO241.053e-4346.23Flavoprotein wrbA OS=Escherichia coli O139:H28 (st... [more]
WRBA_SALTY1.375e-4345.23Flavoprotein wrbA OS=Salmonella typhimurium GN=wrb... [more]
WRBA_SALPC1.375e-4345.23Flavoprotein wrbA OS=Salmonella paratyphi C (strai... [more]
WRBA_GEOMG1.375e-4349.75Flavoprotein wrbA OS=Geobacter metallireducens (st... [more]
WRBA_ESCF31.375e-4346.23Flavoprotein wrbA OS=Escherichia fergusonii (strai... [more]
WRBA_SALSV1.795e-4345.23Flavoprotein wrbA OS=Salmonella schwarzengrund (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886758 ID=CV886758; Name=CV886758; organism=Citrus sinensis; type=EST; length=857bp
ATTTATGTAAGAAGAAGTACAAATAATCAACCAAGCAACTTTTTATCATG
AAGAAAAGCCACTATATGACACACGCACAAAGCTTATACTGATAACAAAG
CAAGAATTTATTGTTTGCAAACCAGAAGATATAGGAAACCGGGAATTCTA
GAGACGAAAAGAATGGAATAAGTCCACCTAATGGTTGTATTGTAAATTGA
AATATTTAAGCACTTCCCTTCAGCTTCTTTGCAATGCCCGCAATGTGTTT
TCCCTGGTGGAAAGCTTGCTCCAACTCAAGCTCAGTTGGCTGTCTCGAGC
CATCTCCAGCAAAAGTTCCTGCACCGTAGGGACTTCCACCTTTCACTTTC
TCCATCTCAAACATGCCAGCACCAAATGTGTATCCAATAGGAACAAATAT
CATCCCATGGTGAACAAGCTGAGTAATTGCCGTCAACGCTGTAGTCTCTT
GTCCACCACCTTGTGACCCAGTGCTGTAGAACATCCCAGCAGGTTTGCCA
GCGAGCTGTTGTGTCCTCCATAGACCACCAGTAGCATCTAAAAATGCTTT
AAATTGAGCAGCCATCATTCCAAATCTTGTTGGGAAGCCAAAAACAAACC
CATCAGCCTCAGCAAGTTCGTTGGGGGTAATAATAGGTACATCACTCTTT
GGTGGTGCACTCATCTTACCAAGTACCTCCTCAGGTAGTGTCTCAGGGAC
CTGCCATAATTTGGCTTCAACACCCTCAACAGATGAAGCTCCTTTCTTTA
TCTCTTCTGCCAGTTTCTCTACATGTCCATACATGGAATAGTACACAATA
TACACTTTGGTTGCCATCTCTTAAGGAGTCTTCTTCGACGAGTCTCTGTT
ACTTCCT
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