CV886758

Overview
NameCV886758
Unique NameCV886758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_TOLAT (Flavoprotein wrbA OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=wrbA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.543e-42
Identity = 94/200 (47.00%), Postives = 116/200 (58.00%), Query Frame = -2
Query:  215 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 811
            TKV ++Y+SMYGH+E +A  I +GA  V GVE  + +VPET+            +   P+ TP EL + D  +FG PTRFG M AQ + FLD TGGLW    L GK A +F               T  T L HHGM+ VPIGY   A MF++  V GG+PYGA T A GDGSRQP   EL  A  QGKH+A +A K+KG
Sbjct:    2 TKVLVLYHSMYGHIETMANSIAEGAREVSGVEVTIKRVPETMDPARFAAAGGKTEQSAPVATPAELVDYDAIIFGVPTRFGNMTAQMRNFLDQTGGLWAKGALFGKIASVFASTGVGGGQEMTITST-WTTLAHHGMVIVPIGYG-TAEMFDISHVGGGTPYGATTLAGGDGSRQPDARELAIARFQGKHVATVAAKMKG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ALHEH (Flavoprotein wrbA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42
Identity = 89/199 (44.72%), Postives = 121/199 (60.80%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            K+ ++YYSMYGH+  +A+ + +G+  V G    + +VPE + EE L K  AP   D P+  P ELA+ DG +FG PTRFG MA Q + FLD TGGLW   +L GK   +F            T  +  T L+HHGM+ V + Y+  A +  M+++ GG+PYGA T AG DGSRQP+E EL  A  QG+H+A I +KL G
Sbjct:    3 KILVLYYSMYGHIRTMADAVAEGSREVSGTTVDIKRVPELMSEEALRKAGAPA-DDTPVARPEELADYDGIIFGSPTRFGNMAGQMRNFLDQTGGLWAQGKLIGKVGSVFTSTGSQHGGQETTLTSMQTTLMHHGMVIVGVPYSC-AALTNMDEITGGTPYGASTLAGPDGSRQPSENELTIARFQGRHVAEITQKLAG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: YCP4_YEAST (Flavoprotein-like protein YCP4 OS=Saccharomyces cerevisiae GN=YCP4 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.744e-41
Identity = 95/199 (47.74%), Postives = 124/199 (62.31%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK-SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFG-AGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            K+ I+ YS YGH++ LA+ +KKG  +  G +A +++V ETLP+EVL KM+AP K  D+P+ T   L E D F+FG PTRFG + AQ+ AF D TGGLW    L GK AG+F            T    ++ L HHG+IF+P+GY    A +  +E+V GGSP+GAGT AG DGSR  + LEL  A  QGK     AKKL
Sbjct:    3 KIAIITYSTYGHIDVLAQAVKKGVEAAGG-KADIYRVEETLPDEVLTKMNAPQKPEDIPVATEKTLLEYDAFLFGVPTRFGNLPAQWSAFWDKTGGLWAKGSLNGKAAGIFVSTSSYGGGQESTVKACLSYLAHHGIIFLPLGYKNSFAELASIEEVHGGSPWGAGTLAGPDGSRTASPLELRIAEIQGKTFYETAKKL 200          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METEP (Flavoprotein wrbA OS=Methylobacterium extorquens (strain PA1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 93/199 (46.73%), Postives = 122/199 (61.31%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYS +GHVE++A+ + +GA    G E  L +VPE +P+EV  +       + PI T  ELA+ D  +FG PTR+G MA+Q K F+D TGGLW    L GK    F            T  +  T L HHGM+ V + Y+F AG   +E+VKG SPYGA T A GDGSRQP+E+EL+ A  QG+H+AGIA KL G
Sbjct:    3 KVLVLYYSSWGHVEQMAKAVAEGARET-GAEVALKRVPELVPDEVAKQFHYKLDQEAPIATVEELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWAKGALVGKVGSAFTSTASQHGGQETTLTSFHTVLFHHGMVVVGLPYSF-AGQNGVEQVKGNSPYGATTIADGDGSRQPSEVELDGARFQGRHVAGIAAKLAG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METC4 (Flavoprotein wrbA OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 93/199 (46.73%), Postives = 122/199 (61.31%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYS +GHVE++A+ + +GA    G E  L +VPE +P+EV  +       + PI T  ELA+ D  +FG PTR+G MA+Q K F+D TGGLW    L GK    F            T  +  T L HHGM+ V + Y+F AG   +E+VKG SPYGA T A GDGSRQP+E+EL+ A  QG+H+AGIA KL G
Sbjct:    3 KVLVLYYSSWGHVEQMAKAVAEGARET-GAEVALKRVPELVPDEVAKQFHYKLDQEAPIATVEELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWAKGALVGKVGSAFTSTASQHGGQETTLTSFHTVLFHHGMVVVGLPYSF-AGQNGVEQVKGNSPYGATTIADGDGSRQPSEVELDGARFQGRHVAGIAAKLAG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_MARAV (Flavoprotein wrbA OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A  + +GA  V+G +  + +VPET+ +E             P+  P ELA+ D  +FG PTRFG MA Q + FLD TGGLW   +L GK  G  +           T  +  T L HHGM+ VP+GY      F++ +V GG+PYGA T A GDGSRQP+E EL  A  QGKH+A +A KL G
Sbjct:    3 KVLVLYYSMYGHIETMANTVAEGARGVDGADVVVKRVPETMADEAFLNAGGKADQGAPVADPKELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWAEGKLHGK-VGSVFTSTGTGGGQEQTITSFWTTLAHHGMVLVPLGYGI-PEFFDISEVNGGTPYGASTIAGGDGSRQPSEKELAIARFQGKHVAELAIKLHG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURVG (Flavoprotein wrbA OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 89/197 (45.18%), Postives = 120/197 (60.91%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ + +GA SV GVE  L +VPET+P +    +        P+ T +ELA  D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+ +M+++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHVAEGAKSVPGVEVTLKRVPETIPVDQAKAIGVKVDQAAPVATVDELANYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVDMKEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAQLAAKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURCJ (Flavoprotein wrbA OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKVDQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELANKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURCH (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain HI2424) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKVDQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURCC (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain MC0-3) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKVDQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASKL 198          
The following BLAST results are available for this feature:
BLAST of CV886758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_TOLAT7.543e-4247.00Flavoprotein wrbA OS=Tolumonas auensis (strain DSM... [more]
WRBA_ALHEH9.852e-4244.72Flavoprotein wrbA OS=Alkalilimnicola ehrlichei (st... [more]
YCP4_YEAST3.744e-4147.74Flavoprotein-like protein YCP4 OS=Saccharomyces ce... [more]
WRBA_METEP6.386e-4146.73Flavoprotein wrbA OS=Methylobacterium extorquens (... [more]
WRBA_METC46.386e-4146.73Flavoprotein wrbA OS=Methylobacterium chloromethan... [more]
WRBA_MARAV6.386e-4144.72Flavoprotein wrbA OS=Marinobacter aquaeolei (strai... [more]
WRBA_BURVG6.386e-4145.18Flavoprotein wrbA OS=Burkholderia vietnamiensis (s... [more]
WRBA_BURCJ6.386e-4145.69Flavoprotein wrbA OS=Burkholderia cepacia (strain ... [more]
WRBA_BURCH6.386e-4145.69Flavoprotein wrbA OS=Burkholderia cenocepacia (str... [more]
WRBA_BURCC6.386e-4145.69Flavoprotein wrbA OS=Burkholderia cenocepacia (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886758 ID=CV886758; Name=CV886758; organism=Citrus sinensis; type=EST; length=857bp
ATTTATGTAAGAAGAAGTACAAATAATCAACCAAGCAACTTTTTATCATG
AAGAAAAGCCACTATATGACACACGCACAAAGCTTATACTGATAACAAAG
CAAGAATTTATTGTTTGCAAACCAGAAGATATAGGAAACCGGGAATTCTA
GAGACGAAAAGAATGGAATAAGTCCACCTAATGGTTGTATTGTAAATTGA
AATATTTAAGCACTTCCCTTCAGCTTCTTTGCAATGCCCGCAATGTGTTT
TCCCTGGTGGAAAGCTTGCTCCAACTCAAGCTCAGTTGGCTGTCTCGAGC
CATCTCCAGCAAAAGTTCCTGCACCGTAGGGACTTCCACCTTTCACTTTC
TCCATCTCAAACATGCCAGCACCAAATGTGTATCCAATAGGAACAAATAT
CATCCCATGGTGAACAAGCTGAGTAATTGCCGTCAACGCTGTAGTCTCTT
GTCCACCACCTTGTGACCCAGTGCTGTAGAACATCCCAGCAGGTTTGCCA
GCGAGCTGTTGTGTCCTCCATAGACCACCAGTAGCATCTAAAAATGCTTT
AAATTGAGCAGCCATCATTCCAAATCTTGTTGGGAAGCCAAAAACAAACC
CATCAGCCTCAGCAAGTTCGTTGGGGGTAATAATAGGTACATCACTCTTT
GGTGGTGCACTCATCTTACCAAGTACCTCCTCAGGTAGTGTCTCAGGGAC
CTGCCATAATTTGGCTTCAACACCCTCAACAGATGAAGCTCCTTTCTTTA
TCTCTTCTGCCAGTTTCTCTACATGTCCATACATGGAATAGTACACAATA
TACACTTTGGTTGCCATCTCTTAAGGAGTCTTCTTCGACGAGTCTCTGTT
ACTTCCT
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