CV886758

Overview
NameCV886758
Unique NameCV886758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURM1 (Flavoprotein wrbA OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.340e-41
Identity = 89/197 (45.18%), Postives = 120/197 (60.91%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+++ +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQQVAEGAKSVPGVEVTLKRVPETIPADQAKAIGIKTDQAAPVATVDELADYDAILFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURCA (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain AU 1054) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.340e-41
Identity = 89/197 (45.18%), Postives = 119/197 (60.41%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGH+E +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHIETMAQHIVEGAKSVPGVEVTLKRVPETIPVDQARAIGVKVDQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_THICR (Flavoprotein wrbA OS=Thiomicrospira crunogena (strain XCL-2) GN=wrbA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.089e-40
Identity = 93/201 (46.27%), Postives = 120/201 (59.70%), Query Frame = -2
Query:  212 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKGS 811
            TKV ++YYSMYGHVE +A+ I +GA SVEGVE  + +VPE + +E   K         PI TP+ELA+ D  +FG PTRFG M AQ + FLD TGGLW   +L  K   +F            T  +  T L H+GMI V + Y+    M  M ++ GG+PYGA T A GDGSRQP+E E++ A  QG H+A +AKK   S
Sbjct:    2 TKVLVLYYSMYGHVETMAKAIAEGAGSVEGVEVTIKRVPELMTDEQAKKAGVKLDQSAPIATPSELADYDAIIFGTPTRFGNMCAQMRNFLDQTGGLWAGGKLINKVGSVFTSTGTQHGGQETTITSFHTNLFHYGMIVVGVPYSC-QEMTNMNEITGGTPYGASTLAGGDGSRQPSENEIKIAKCQGVHVAKVAKKQSAS 201          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_GEOUR (Flavoprotein wrbA OS=Geobacter uraniireducens (strain Rf4) GN=wrbA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.423e-40
Identity = 91/201 (45.27%), Postives = 118/201 (58.71%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA----PPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV I YYSMYGH+ ++AE + +GA  V G E  + +VPETLP +VL KM A       + +P+ T  ELA+AD  +FG PTRFG M  Q + FLDATGGLW    L GK   +F            T L+    L+H GM+ V + Y F  G    +++ GGSPYGA T AG  G R P+E +L  A +QGKH+A IA +L
Sbjct:    2 KVLIAYYSMYGHIHRMAEAVAEGAREVAGAEVLIRRVPETLPADVLEKMGAVETQKKMAQIPVCTIGELADADAIIFGTPTRFGNMCGQMRQFLDATGGLWMKGSLVGKLGSVFTSSATQHGGQESTILSFHITLLHQGMVVVGLPYAF-QGQMRNDEIIGGSPYGASTIAGTQGERSPSENDLAAARYQGKHVASIAARL 201          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_AGRRK (Flavoprotein wrbA OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=wrbA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.423e-40
Identity = 94/197 (47.72%), Postives = 119/197 (60.41%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGH+EK+A  + +GA S  G E  + +VPE +PEEV          + PI TP+ELAE D  + G  TRFG +A+Q + F D TGGLW + +L GK   +F            T L  I  L+HHGM  V + Y F AG    E+VKGGSPYGA T   GDGSRQP+E+ELE A +QG H+A IA KL
Sbjct:    3 KVLVLYYSAYGHIEKMAYAVAEGAKSA-GAEVTVKRVPELVPEEVAKASYFKLDQEAPIATPDELAEYDAIIVGAGTRFGTVASQMRNFWDQTGGLWFSGKLVGKVGSVFTSSATQHGGQESTILGFIPTLLHHGMAVVGLPYAF-AGQMGTEEVKGGSPYGASTITNGDGSRQPSEIELEAAKYQGAHVAKIAAKL 197          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_RHOCS (Flavoprotein wrbA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=wrbA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.858e-40
Identity = 90/200 (45.00%), Postives = 119/200 (59.50%), Query Frame = -2
Query:  215 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 811
            TKV ++YYS YGH+E +A+ + +GA SV G E  + +VPE +PEEV            P+ T  ELAE D  + G PTRFG M +Q   FLD TGGLW    L GK    F            T  + +T L+HHGM+ V + Y++  G+  +E+VKGG+PYGA T A GDGSR+PTE+EL  A +QG  +A  A KL+G
Sbjct:    2 TKVLVLYYSSYGHIETMAQAVAEGARSVPGTEVAVKRVPELVPEEVARNAGMKLDQPAPVATVAELAEYDAIIVGSPTRFGRMTSQMANFLDQTGGLWAKGALNGKVGAAFTSTASQHGGQETTLFSILTNLLHHGMVVVGLPYSY-EGLSGVEQVKGGTPYGASTIADGDGSRRPTEVELGGARYQGALVARTAAKLRG 200          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_PHOLL (Flavoprotein wrbA OS=Photorhabdus luminescens subsp. laumondii GN=wrbA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.169e-40
Identity = 90/199 (45.23%), Postives = 117/199 (58.79%), Query Frame = -2
Query:  218 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 811
            TK+ ++YYSMYGH+E LA  + +GA  V  VE  + +VPET+P E   K         P+ +  EL + D  + G PTRFG MA Q + FLD TGGLW   +L GK A +F               T  T L HHG I VPIGY     + ++ +++GG+PYGA T A GDGSR P E EL+ A +QG+H+A IAKKLK
Sbjct:    2 TKILVLYYSMYGHIEALASAVAEGAKKVADVEVTIKRVPETIPPEAFTKAGGKVDQSAPVASVQELVDYDAIIIGTPTRFGNMAGQMRNFLDQTGGLWAEGKLYGKVASVFTSTGVGGGQEMTITST-WTTLAHHGFIIVPIGYGI-PEIGDISQMQGGTPYGASTIADGDGSRIPNENELKIARYQGEHVAKIAKKLK 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SYNFM (Flavoprotein wrbA OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=wrbA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV IV+YSMYGH+ ++AE + +G  SV+G EA L +VPETL  E+L  M A       + +P+ T +EL  AD  +FG PTRFG MA Q + FLDATG LW +  L GK   +F            T L+    L+H GM+ V + Y+F  G   M+++ GGSPYGA T AG  G+R P++ EL  A +QG+H+A IA+KL
Sbjct:    2 KVLIVFYSMYGHIYRMAEAVAEGVRSVDGAEAVLRRVPETLSAEILASMGATEAQKQFAHIPVCTVDELGAADAVIFGTPTRFGNMAGQMRQFLDATGRLWVSGALVGKAGSVFTSSNTQHGGQESTILSFHINLLHQGMVIVGLPYSF-QGQSTMDEITGGSPYGASTIAGPTGARTPSDNELAGARYQGRHVAEIARKL 201          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METAC (Flavoprotein wrbA OS=Methanosarcina acetivorans GN=wrbA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 97/207 (46.86%), Postives = 123/207 (59.42%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIIT--PNE--LAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV I++YSMYGHV ++AE +  GA  VEG E  ++QVPETLPEEVL KM A       + +P++T   NE  LA AD  +FG PTR+G M AQ +A LD  GGLW      GK   +F            T LT    L+H GMI V + Y+       M+++ GGSPYG  T A GDGSRQP+E EL  A +QG+H+  IAKK+ G
Sbjct:    3 KVNIIFYSMYGHVYRMAEAVAAGAREVEGAEVGIYQVPETLPEEVLEKMGAIETKKLFAHIPVLTREMNEEVLAGADALIFGTPTRYGNMTAQMRAVLDGLGGLWNRDAFVGKVGSVFTSSGTQHGGQESTILTFHVTLLHLGMILVGLPYS-EKRQTRMDEITGGSPYGVSTIAGGDGSRQPSENELAMARYQGRHVTLIAKKIAG 208          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURS3 (Flavoprotein wrbA OS=Burkholderia sp. (strain 383) GN=wrbA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +ELA+ D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+HHGM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGK +A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHIAEGAKSVAGVEVTLKRVPETIPVDQARAIGVKVDQAAPVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKRVAELASKL 198          
The following BLAST results are available for this feature:
BLAST of CV886758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_BURM18.340e-4145.18Flavoprotein wrbA OS=Burkholderia multivorans (str... [more]
WRBA_BURCA8.340e-4145.18Flavoprotein wrbA OS=Burkholderia cenocepacia (str... [more]
WRBA_THICR1.089e-4046.27Flavoprotein wrbA OS=Thiomicrospira crunogena (str... [more]
WRBA_GEOUR1.423e-4045.27Flavoprotein wrbA OS=Geobacter uraniireducens (str... [more]
WRBA_AGRRK1.423e-4047.72Flavoprotein wrbA OS=Agrobacterium radiobacter (st... [more]
WRBA_RHOCS1.858e-4045.00Flavoprotein wrbA OS=Rhodospirillum centenum (stra... [more]
WRBA_PHOLL3.169e-4045.23Flavoprotein wrbA OS=Photorhabdus luminescens subs... [more]
WRBA_SYNFM4.139e-4045.27Flavoprotein wrbA OS=Syntrophobacter fumaroxidans ... [more]
WRBA_METAC4.139e-4046.86Flavoprotein wrbA OS=Methanosarcina acetivorans GN... [more]
WRBA_BURS34.139e-4045.18Flavoprotein wrbA OS=Burkholderia sp. (strain 383)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886758 ID=CV886758; Name=CV886758; organism=Citrus sinensis; type=EST; length=857bp
ATTTATGTAAGAAGAAGTACAAATAATCAACCAAGCAACTTTTTATCATG
AAGAAAAGCCACTATATGACACACGCACAAAGCTTATACTGATAACAAAG
CAAGAATTTATTGTTTGCAAACCAGAAGATATAGGAAACCGGGAATTCTA
GAGACGAAAAGAATGGAATAAGTCCACCTAATGGTTGTATTGTAAATTGA
AATATTTAAGCACTTCCCTTCAGCTTCTTTGCAATGCCCGCAATGTGTTT
TCCCTGGTGGAAAGCTTGCTCCAACTCAAGCTCAGTTGGCTGTCTCGAGC
CATCTCCAGCAAAAGTTCCTGCACCGTAGGGACTTCCACCTTTCACTTTC
TCCATCTCAAACATGCCAGCACCAAATGTGTATCCAATAGGAACAAATAT
CATCCCATGGTGAACAAGCTGAGTAATTGCCGTCAACGCTGTAGTCTCTT
GTCCACCACCTTGTGACCCAGTGCTGTAGAACATCCCAGCAGGTTTGCCA
GCGAGCTGTTGTGTCCTCCATAGACCACCAGTAGCATCTAAAAATGCTTT
AAATTGAGCAGCCATCATTCCAAATCTTGTTGGGAAGCCAAAAACAAACC
CATCAGCCTCAGCAAGTTCGTTGGGGGTAATAATAGGTACATCACTCTTT
GGTGGTGCACTCATCTTACCAAGTACCTCCTCAGGTAGTGTCTCAGGGAC
CTGCCATAATTTGGCTTCAACACCCTCAACAGATGAAGCTCCTTTCTTTA
TCTCTTCTGCCAGTTTCTCTACATGTCCATACATGGAATAGTACACAATA
TACACTTTGGTTGCCATCTCTTAAGGAGTCTTCTTCGACGAGTCTCTGTT
ACTTCCT
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