CV886758

Overview
NameCV886758
Unique NameCV886758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_AZOSE (Flavoprotein wrbA OS=Azoarcus sp. (strain EbN1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 91/201 (45.27%), Postives = 119/201 (59.20%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSD----VPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV I++YSMYGH+ ++AE + +GA SV G E  L++VPE +P+EVL K  A         VP+    +L EAD  +FG PTRFG M AQ + FLD TGGLW    L GK   +F            T L+    L+H GM+ V + YT    M  M+++ GGSPYGA T A GDGSR P++ E+E A  QG+H+A IA  L
Sbjct:    2 KVQIIFYSMYGHIFRMAEAVAEGARSVAGAEVGLFRVPELVPDEVLEKSGAKTAQQAFAHVPVAKTEQLPEADAIIFGTPTRFGNMCAQMRNFLDQTGGLWMKGSLVGKVGSVFTSTATQHGGQESTILSTHITLLHQGMVLVGLPYTEKRQM-GMDEILGGSPYGAATIAGGDGSRMPSQTEIEMAKFQGRHVAEIASAL 201          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_AZOSB (Flavoprotein wrbA OS=Azoarcus sp. (strain BH72) GN=wrbA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 91/199 (45.73%), Postives = 117/199 (58.79%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYS YGH+EK+AE +  GA    G E  + +VPE +PEEV  K         P+ T  EL + D  +FG PTRFG MA+Q + FLD TGGLW + +L GK   +F            T  +  T L+HHGM+ V + YT  A    M+++ GGSPYGA T A GDG+RQP+E EL  A  QG H+A IA KL G
Sbjct:    3 KVLVLYYSSYGHIEKMAEAVAAGARDA-GAEVTIKRVPELVPEEVARKSGMKLDQPAPVATVGELPDYDAIIFGTPTRFGNMASQMRNFLDQTGGLWMSGKLVGKVGSVFASTATQHGGQETTITSFHTTLLHHGMVIVGLPYT-EARQMNMDEITGGSPYGATTLAKGDGTRQPSENELAMARFQGGHVAKIAAKLAG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: P25_SCHPO (P25 protein OS=Schizosaccharomyces pombe GN=obr1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 95/192 (49.48%), Postives = 120/192 (62.50%), Query Frame = -2
Query:  248 ATKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGY--TFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGK 814
            A  V IV YS YGHV KLAE  K G     G +A ++Q PETL  E+L KM A PK + P++T + L + D F+FG+PTR+G   AQF+ F D+TGGLW    L GK  G F+           TALTA+T  VHHGMIFVP+GY  TF   M  +E + GGS +GAG++AG DGSR  ++ ELE A  QG+
Sbjct:    4 ANTVAIVIYSTYGHVVKLAEAEKAGIEKAGG-KAVIYQFPETLSPEILEKMHAAPKPNYPVVTLDVLTQYDAFLFGYPTRYGTPPAQFRTFWDSTGGLWVQGALHGKYFGQFFSTGTLGGGQESTALTAMTSFVHHGMIFVPLGYKNTFSL-MANVESIHGGSSWGAGSYAGADGSRNVSDDELEIARIQGE 193          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METPB (Flavoprotein wrbA OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=wrbA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 91/199 (45.73%), Postives = 120/199 (60.30%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYS +GHVE++A  + +GA    G E  + +VPE +PEEV  +         PI T  ELA+ D  +FG PTR+G MA+Q K F+D TGGLW    L GK    F            T  +  T + HHGM+ V + Y+F AG   +E+VKG SPYGA T A GDGSRQP+++EL+ A  QG+H+AGIA KL G
Sbjct:    3 KVLVLYYSSWGHVEQMANAVAEGAREA-GAEVAVKRVPELVPEEVARQFHYKLDQAAPIATVEELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWAKGALVGKVGSAFTSTASQHGGQETTLTSFHTVMFHHGMVVVGLPYSF-AGQNGVEQVKGNSPYGATTIADGDGSRQPSQVELDGARFQGRHVAGIAAKLAG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURPP (Flavoprotein wrbA OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=wrbA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 86/199 (43.22%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYSMYGH+E +A+ + +GA SV G E  + +V ET+P +             P+ TP+ELA  D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  + L+H GM+ V + Y+  AG+  M ++ GG+PYGA T AG DGSRQP++ EL+ A  QGKH+A +A K+ G
Sbjct:    3 KVLVLYYSMYGHIETMADAVAEGARSVPGTEVTIKRVAETIPADQAAAHGVKLDQKAPVATPDELANYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHSTLLHQGMVIVGVPYSC-AGLVNMTEITGGTPYGATTLAGADGSRQPSQNELDIARFQGKHVASLALKIAG 200          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_ACICJ (Flavoprotein wrbA OS=Acidiphilium cryptum (strain JF-5) GN=wrbA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.204e-39
Identity = 91/199 (45.73%), Postives = 117/199 (58.79%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYS +GHVE +A+ + +GA +  G E  L +VPET+PE+    + A    D P+ TP ELA+ D  +FG PTRFG M  Q + FLD TGGLW    L GK   +F            T  +  T L HHGMI V + Y+    +  M ++ GG+PYGA T AG DGSRQP+  EL  A  QGKH+AGIA KL G
Sbjct:    3 KVLVLYYSTWGHVETMAKAVAEGAKAA-GAEVTLKRVPETMPEDTAKAIHAKTDQDAPVATPAELADYDAIIFGTPTRFGNMCGQMRNFLDQTGGLWAKGALIGKVGSVFASTGTQHGGQETTITSFHTTLFHHGMIVVGVPYS-NPELTNMNEITGGTPYGATTLAGADGSRQPSANELAIARAQGKHVAGIAAKLAG 199          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_HALHL (Flavoprotein wrbA OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 93/204 (45.59%), Postives = 121/204 (59.31%), Query Frame = -2
Query:  215 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQ----LVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 811
            +KV ++YYSMYGHVE LA+ + +GA    G E  + +VPET+PE+V  +  A    + P+ +  ELA+ D  +FG PTRFG MA Q + FLD TG LW   QL GK   +F               T IT     L HHGM+ V + Y     + ++  VKGGSPYGAGT A GDGSRQP E EL  A +QG+H+A IA++L G
Sbjct:    2 SKVLVLYYSMYGHVETLAQAVAEGARGA-GSEVVIKRVPETMPEDVARQAGAKLDQEAPVASLEELADYDAILFGTPTRFGNMAGQMRNFLDQTGSLWFNGQLIGKVGSVFTSTGTGGGNE-----TTITSFWHTLAHHGMVIVGLSYA-APELADLSVVKGGSPYGAGTIAGGDGSRQPNEQELALARYQGRHVAEIAQRLHG 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_AZOVD (Flavoprotein wrbA OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=wrbA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.683e-39
Identity = 91/202 (45.05%), Postives = 121/202 (59.90%), Query Frame = -2
Query:  218 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQ----LVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLK 808
            K+ ++YYSMYGH+E++AE + +GA SV GVE  L +VPET+PEEV  K  A      P   P ELA+ D  +FG PTRFG MA Q + FLD TGGLW +  L GK A +F             + T IT     L HHGM+ V + Y     + ++ + +GGSPYGA T AG DGSR+P+E EL  A  QG H+A +  +++
Sbjct:    3 KILVLYYSMYGHIERMAEAVAEGARSVPGVEVTLKRVPETMPEEVARKAGAKLDQAAPPAEPKELADYDAILFGTPTRFGNMAGQMRNFLDQTGGLWVSGALVGKFASVF-----TSTGTGGGSETTITSFWHTLAHHGMVIVGLPYVL-PELSDVSEPRGGSPYGAATIAGADGSRRPSEKELILASFQGAHVARLVVRMQ 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURCM (Flavoprotein wrbA OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=wrbA PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.504e-39
Identity = 88/197 (44.67%), Postives = 116/197 (58.88%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +EL   D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F            T  +  T L+H GM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHIAEGAKSVPGVEVTLKRVPETIPADQAKAIGVKVDQAAPVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METS4 (Flavoprotein wrbA OS=Methylobacterium sp. (strain 4-46) GN=wrbA PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 88/199 (44.22%), Postives = 117/199 (58.79%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV ++YYS YGH+E++A  + +GA    G E  + +VPE +PE+V  K         P+   +EL   D  +FG PTR+G MA+Q K FLD TGGLW    L GK   +F            T L+  T L+HHGM+ V + Y F  G   + +V G SPYGA T A GDGSRQP+ +EL+ A +QG+H+AGIA KL G
Sbjct:    3 KVLVLYYSTYGHIEQMAHAVAEGAREA-GAEVDVKRVPELVPEDVARKSHFKLDQSAPLARVDELPNYDAIIFGTPTRYGNMASQMKNFLDQTGGLWMKGALVGKVGSVFTSSASQHGGQESTILSFHTVLLHHGMVLVGLPYAF-QGQLGVSQVMGNSPYGASTIADGDGSRQPSPIELDGARYQGRHVAGIAAKLAG 199          
The following BLAST results are available for this feature:
BLAST of CV886758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_AZOSE7.060e-4045.27Flavoprotein wrbA OS=Azoarcus sp. (strain EbN1) GN... [more]
WRBA_AZOSB7.060e-4045.73Flavoprotein wrbA OS=Azoarcus sp. (strain BH72) GN... [more]
P25_SCHPO7.060e-4049.48P25 protein OS=Schizosaccharomyces pombe GN=obr1 P... [more]
WRBA_METPB9.221e-4045.73Flavoprotein wrbA OS=Methylobacterium populi (stra... [more]
WRBA_BURPP9.221e-4043.22Flavoprotein wrbA OS=Burkholderia phytofirmans (st... [more]
WRBA_ACICJ1.204e-3945.73Flavoprotein wrbA OS=Acidiphilium cryptum (strain ... [more]
WRBA_HALHL2.054e-3945.59Flavoprotein wrbA OS=Halorhodospira halophila (str... [more]
WRBA_AZOVD2.683e-3945.05Flavoprotein wrbA OS=Azotobacter vinelandii (strai... [more]
WRBA_BURCM3.504e-3944.67Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_METS44.576e-3944.22Flavoprotein wrbA OS=Methylobacterium sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886758 ID=CV886758; Name=CV886758; organism=Citrus sinensis; type=EST; length=857bp
ATTTATGTAAGAAGAAGTACAAATAATCAACCAAGCAACTTTTTATCATG
AAGAAAAGCCACTATATGACACACGCACAAAGCTTATACTGATAACAAAG
CAAGAATTTATTGTTTGCAAACCAGAAGATATAGGAAACCGGGAATTCTA
GAGACGAAAAGAATGGAATAAGTCCACCTAATGGTTGTATTGTAAATTGA
AATATTTAAGCACTTCCCTTCAGCTTCTTTGCAATGCCCGCAATGTGTTT
TCCCTGGTGGAAAGCTTGCTCCAACTCAAGCTCAGTTGGCTGTCTCGAGC
CATCTCCAGCAAAAGTTCCTGCACCGTAGGGACTTCCACCTTTCACTTTC
TCCATCTCAAACATGCCAGCACCAAATGTGTATCCAATAGGAACAAATAT
CATCCCATGGTGAACAAGCTGAGTAATTGCCGTCAACGCTGTAGTCTCTT
GTCCACCACCTTGTGACCCAGTGCTGTAGAACATCCCAGCAGGTTTGCCA
GCGAGCTGTTGTGTCCTCCATAGACCACCAGTAGCATCTAAAAATGCTTT
AAATTGAGCAGCCATCATTCCAAATCTTGTTGGGAAGCCAAAAACAAACC
CATCAGCCTCAGCAAGTTCGTTGGGGGTAATAATAGGTACATCACTCTTT
GGTGGTGCACTCATCTTACCAAGTACCTCCTCAGGTAGTGTCTCAGGGAC
CTGCCATAATTTGGCTTCAACACCCTCAACAGATGAAGCTCCTTTCTTTA
TCTCTTCTGCCAGTTTCTCTACATGTCCATACATGGAATAGTACACAATA
TACACTTTGGTTGCCATCTCTTAAGGAGTCTTCTTCGACGAGTCTCTGTT
ACTTCCT
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