CV886758

Overview
NameCV886758
Unique NameCV886758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METRJ (Flavoprotein wrbA OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=wrbA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.739e-38
Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE++A  + +GA    G E  + +VPE +PEEV  +         P+ T  ELA+ D  +FG PTR+G MA+Q K F+D TGGLW    L GK   +F            T  +  T L HHGM+ V + Y+F  G   +E VKG +PYGA T A GDGSRQP+ +ELE A  QG+H+AGIA KL
Sbjct:    3 KVLVLYYSTYGHVEQMAYAVAEGARET-GAEVVVKRVPELVPEEVARQNHFKLDQAAPVATVAELADYDAIIFGTPTRYGNMASQMKQFIDQTGGLWMKGALVGKVGSVFTSTASQHGGQETTLTSFHTVLFHHGMVVVGLPYSF-QGQAGVEAVKGNTPYGASTIADGDGSRQPSAVELEGARFQGRHVAGIAAKL 197          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_NITOC (Flavoprotein wrbA OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=wrbA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.966e-38
Identity = 88/198 (44.44%), Postives = 116/198 (58.59%), Query Frame = -2
Query:  221 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 811
            TK+ ++YYSMYGHVE +A  + +GA SVE VE  L +VPE +PEE+     A    + PI T +EL E D  +FG PTRFG M AQ + FLD TG  W +  L GK   +F            T  +  + L+H GM+ V + Y+  A +  M ++ GGSPYGA T A  DGSRQP+E EL  A  QG+H+A   KK+
Sbjct:    2 TKLLVLYYSMYGHVETMAHAVAEGARSVEEVEVTLKRVPELMPEEIARNAGAKLAQEAPIATVDELPEYDAIIFGTPTRFGNMCAQMRNFLDQTGKHWMSGALIGKVGSVFTSTASQHGGQETTITSFHSTLLHQGMVIVGVPYSCQA-LLNMNEITGGSPYGASTLADADGSRQPSENELTIARFQGEHVAKFTKKV 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_GEOLS (Flavoprotein wrbA OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=wrbA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.966e-38
Identity = 92/202 (45.54%), Postives = 118/202 (58.42%), Query Frame = -2
Query:  221 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 811
            +K+ IV+YSMYGH+  +AE +  G  SV G  A+L QVPE + EEVL K  A       + +P  T   LAEAD  +FG PTRFG MAAQ + FLD TG LW +  L GK   +F            T  +  + L+HHGMI V + YT    +  M+++ GGSPYGA T A GDGSR+P+E EL  A  QG H+A I  +L
Sbjct:    2 SKIQIVFYSMYGHIHTMAEAVADGVRSVGGCSAELLQVPELISEEVLEKYGAKAARAAFAHIPTATVERLAEADAIIFGTPTRFGNMAAQMRNFLDQTGKLWLSGGLVGKVGSVFASTATQHGGQETTITSFHSTLLHHGMIIVGVPYT-EQRLLTMDEISGGSPYGATTLAGGDGSRRPSENELAIARFQGAHVAKITARL 202          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_BURA4 (Flavoprotein wrbA OS=Burkholderia ambifaria (strain MC40-6) GN=wrbA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.060e-38
Identity = 86/197 (43.65%), Postives = 115/197 (58.38%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 808
            KV ++YYS YGHVE +A+ + +GA SV GVE  L +VPET+P +    +        P+ T +EL   D  +FG PTRFG MA Q + FLD TG LW    L GK   +F            T  +  T L+H GM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    3 KVLVLYYSSYGHVETMAQHVAEGAKSVPGVEVTLKRVPETIPADQAKAIGVKVDQAAPVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGCLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_SYNAS (Flavoprotein wrbA OS=Syntrophus aciditrophicus (strain SB) GN=wrbA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.923e-37
Identity = 91/201 (45.27%), Postives = 116/201 (57.71%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA----PPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAGDGS-RQPTELELEQAFHQGKHIAGIAKKL 808
            K+ +VYYS YGHV +LAE + +GAS +  VE  + +VPETLPE +L K+         + VP+    EL  AD  +FG P RFG M  Q ++FLDATGGLW    L GK   +F            T L+  T L+HHGMI V + YTF  G    +++ G SPYGA T AG  + R PTE EL  A  QG+H+A IA KL
Sbjct:    2 KIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFAHVPVCEVAELETADAILFGTPARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGTQHGGQESTILSFHTTLLHHGMIIVGLPYTF-QGQSRNDEITGCSPYGASTIAGSANDRWPTENELAGANFQGRHVACIAGKL 201          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_METMA (Flavoprotein wrbA OS=Methanosarcina mazei GN=wrbA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.923e-37
Identity = 89/207 (43.00%), Postives = 121/207 (58.45%), Query Frame = -2
Query:  215 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIIT----PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 808
            KV I+++S++ H+ ++AE +  GA  VEG E  ++QVPETLPE+VL KM A       + +P++T     + LA AD  +FG PTR+GMM AQ +A LD  G LW      GK   +F            T L+    L+H GM+ V + Y        M ++ GGSPYGA T A GDGSRQP+E ELE A +QG+H+  IAKK+ G
Sbjct:    3 KVNIIFHSVHAHIYRMAEAVAAGAREVEGAEVGIYQVPETLPEDVLEKMGAIETKKLFAHIPVVTRDMYEDVLAGADALIFGTPTRYGMMTAQMRAVLDGLGKLWSEDAFVGKVGSVFTSSGTQHGGQESTILSFHVTLLHLGMVIVGLPYAEKRQTI-MNEITGGSPYGASTIAGGDGSRQPSENELEMARYQGRHVTQIAKKIAG 208          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: PST2_YEAST (Protoplast secreted protein 2 OS=Saccharomyces cerevisiae GN=PST2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.280e-37
Identity = 90/189 (47.62%), Postives = 114/189 (60.32%), Query Frame = -2
Query:  248 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGY-TFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGK 808
            +V I+ Y++YGHV   AE  KKG  +  G  A ++QV ETL  EV+  +   PK D PI T + L E D F+FG PTRFG   AQ+KAF D TGGLW    L GK AG F            T + +++ L HHG+IFVP+GY    A +  M++V GGSP+GAGT AG DGSR P+ LEL+    QGK
Sbjct:    3 RVAIIIYTLYGHVAATAEAEKKGIEAAGG-SADIYQVEETLSPEVVKALGGAPKPDYPIATQDTLTEYDAFLFGIPTRFGNFPAQWKAFWDRTGGLWAKGALHGKVAGCF-VSTGTGGGNEATIMNSLSTLAHHGIIFVPLGYKNVFAELTNMDEVHGGSPWGAGTIAGSDGSRSPSALELQVHEIQGK 189          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA1_RHIME (Flavoprotein wrbA 1 OS=Rhizobium meliloti GN=wrbA1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.594e-37
Identity = 85/197 (43.15%), Postives = 114/197 (57.87%), Query Frame = -2
Query:  221 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF-AGDGSRQPTELELEQAFHQGKHIAGIAKKL 808
            +V ++YYS YGH+E +A  + +GA S  G E  + +VPE +PE+V            P+ T  ELA+ D  +FG  TR+G +A+Q + F+D TGGLW   +L GK    F            T L  I  ++HHGM+ V + Y F  G   +E+VKGGSPYGA T   GDGSRQP+ +ELE A  QG H+A IA KL
Sbjct:    3 RVLVLYYSAYGHIETMAHAVAEGARSA-GAEVAVKRVPELVPEDVAKASHFKLDQPAPVATVEELADYDAIIFGAGTRYGTVASQLRNFIDQTGGLWAKGKLVGKVGSAFTSSATQHGGQESTILGLIPTMMHHGMVVVGLPYAF-QGQMGVEEVKGGSPYGASTITGGDGSRQPSAVELEAARFQGAHVARIAAKL 197          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_MARMS (Flavoprotein wrbA OS=Marinomonas sp. (strain MWYL1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.306e-37
Identity = 86/198 (43.43%), Postives = 116/198 (58.59%), Query Frame = -2
Query:  221 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 811
            TKV ++YYS YGH+E +A EI +GA S  G +  + +VPE +PE+V          D P+  P++L   D  +FG PTRFG MA+Q + FLD TGGLW   +L GK  G  +           T  +  T L HHG + V + Y+    + ++ +VKGGSP GAGT AG DGSR P++ E+  A  QGKH+A IA KL
Sbjct:    2 TKVLVLYYSSYGHIEAMANEIAQGARST-GAQVDIKRVPELMPEDVAKNSGVKLDQDAPVAKPDDLVNYDAVIFGSPTRFGNMASQMRNFLDMTGGLWAQGKLVGK-IGSVFTSTGTGGGNETTIQSFHTTLFHHGFVVVGLPYSC-PELADISEVKGGSPLGAGTIAGADGSRMPSDKEIAMARFQGKHVAEIAAKL 196          
BLAST of CV886758 vs. ExPASy Swiss-Prot
Match: WRBA_CHRSD (Flavoprotein wrbA OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=wrbA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.306e-37
Identity = 89/201 (44.28%), Postives = 118/201 (58.71%), Query Frame = -2
Query:  215 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 811
            +KV ++YYS YGHVE LA  + +G   V G +  L++V E +P+EV  K      +   ++  P+ LAE D  V G PTRFG MA+Q + F D TGGLW   +L GK  G F            T  +  T L+HHGM  V + Y+  A + E+++V GG+PYGA T A GDGSRQP+E EL  A  QG+HIA +A KL G
Sbjct:    2 SKVLVLYYSSYGHVETLANAVAEGVRGVAGTQVDLYRVAELVPDEVAAKSGYKEDTTAAVLDDPSVLAEYDAIVVGTPTRFGNMASQMRNFWDKTGGLWAQGKLIGKLGGAFTSTASQHGGQETTLTSIHTTLLHHGMAVVGVPYSCPA-LTELDEVSGGTPYGATTIAGGDGSRQPSENELTIARFQGQHIAEMAAKLAG 201          
The following BLAST results are available for this feature:
BLAST of CV886758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_METRJ1.739e-3845.69Flavoprotein wrbA OS=Methylobacterium radiotoleran... [more]
WRBA_NITOC2.966e-3844.44Flavoprotein wrbA OS=Nitrosococcus oceani (strain ... [more]
WRBA_GEOLS2.966e-3845.54Flavoprotein wrbA OS=Geobacter lovleyi (strain ATC... [more]
WRBA_BURA45.060e-3843.65Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_SYNAS1.923e-3745.27Flavoprotein wrbA OS=Syntrophus aciditrophicus (st... [more]
WRBA_METMA1.923e-3743.00Flavoprotein wrbA OS=Methanosarcina mazei GN=wrbA ... [more]
PST2_YEAST3.280e-3747.62Protoplast secreted protein 2 OS=Saccharomyces cer... [more]
WRBA1_RHIME5.594e-3743.15Flavoprotein wrbA 1 OS=Rhizobium meliloti GN=wrbA1... [more]
WRBA_MARMS7.306e-3743.43Flavoprotein wrbA OS=Marinomonas sp. (strain MWYL1... [more]
WRBA_CHRSD7.306e-3744.28Flavoprotein wrbA OS=Chromohalobacter salexigens (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886758 ID=CV886758; Name=CV886758; organism=Citrus sinensis; type=EST; length=857bp
ATTTATGTAAGAAGAAGTACAAATAATCAACCAAGCAACTTTTTATCATG
AAGAAAAGCCACTATATGACACACGCACAAAGCTTATACTGATAACAAAG
CAAGAATTTATTGTTTGCAAACCAGAAGATATAGGAAACCGGGAATTCTA
GAGACGAAAAGAATGGAATAAGTCCACCTAATGGTTGTATTGTAAATTGA
AATATTTAAGCACTTCCCTTCAGCTTCTTTGCAATGCCCGCAATGTGTTT
TCCCTGGTGGAAAGCTTGCTCCAACTCAAGCTCAGTTGGCTGTCTCGAGC
CATCTCCAGCAAAAGTTCCTGCACCGTAGGGACTTCCACCTTTCACTTTC
TCCATCTCAAACATGCCAGCACCAAATGTGTATCCAATAGGAACAAATAT
CATCCCATGGTGAACAAGCTGAGTAATTGCCGTCAACGCTGTAGTCTCTT
GTCCACCACCTTGTGACCCAGTGCTGTAGAACATCCCAGCAGGTTTGCCA
GCGAGCTGTTGTGTCCTCCATAGACCACCAGTAGCATCTAAAAATGCTTT
AAATTGAGCAGCCATCATTCCAAATCTTGTTGGGAAGCCAAAAACAAACC
CATCAGCCTCAGCAAGTTCGTTGGGGGTAATAATAGGTACATCACTCTTT
GGTGGTGCACTCATCTTACCAAGTACCTCCTCAGGTAGTGTCTCAGGGAC
CTGCCATAATTTGGCTTCAACACCCTCAACAGATGAAGCTCCTTTCTTTA
TCTCTTCTGCCAGTTTCTCTACATGTCCATACATGGAATAGTACACAATA
TACACTTTGGTTGCCATCTCTTAAGGAGTCTTCTTCGACGAGTCTCTGTT
ACTTCCT
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