CX674608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674608 vs. ExPASy Swiss-Prot
Match: ESRP2_DANRE (Epithelial splicing regulatory protein 2 OS=Danio rerio GN=esrp2 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 313 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQF 720 V+R RGLP+ +D DI +FF GL+I L +N GR +GEA V F + AL R + +MG RY+EV++ +++ N A+ + ++QM I++MRGLPF+ +++ F Sbjct: 225 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGTSN---------------EVAQFLSKENQM----IIRMRGLPFTATPQDVLGF 344
BLAST of CX674608 vs. ExPASy Swiss-Prot
Match: FUSIL_DROME (RNA-binding protein fusilli OS=Drosophila melanogaster GN=fus PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11 Identity = 49/168 (29.17%), Postives = 84/168 (50.00%), Query Frame = 1 Query: 313 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFF-----KDYKIIE--DKIHIACRPDGKAT 786 +VR RGLP+ +D DI KFF GL++ L ++ GR +GEA + F + AL+R + ++G RY+EV+R +D+ A+A + E A+ + K I++MRGLP+ +++ FF +++ + + +PDG+AT Sbjct: 280 IVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFL-AIAGGASNE---------------AQAFLSKGAQ---VIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRAT 428
BLAST of CX674608 vs. ExPASy Swiss-Prot
Match: HNRH3_HUMAN (Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens GN=HNRNPH3 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 316 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 540 VRLRGLPF C+ +I +FF GL+IV L ++ GR +GEAFV FA E AL + ++ +G RY+E+FR R + Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSE 95 The following BLAST results are available for this feature:
BLAST of CX674608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674608 ID=CX674608; Name=CX674608; organism=Citrus sinensis; type=EST; length=786bpback to top |