CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNY3 (30S ribosomal protein S5 OS=Synechocystis sp. (strain PCC 6803) GN=rpsE PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.057e-25 Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = -1 Query: 198 KTKKEKVKD-GFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 677 KT +EK +D ++E +L FRAI V+K D ++ ++ VP+TK + H ++G G AKV++RPA+PGTGVIAGGAVR VLE+AGV+N L KQLGSNN LNNARA + A++ ++ + EV+ ERG+ Sbjct: 6 KTSREKKEDTNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLIEVPLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNNARAAINALETLRTFSEVAEERGV 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACAM1 (30S ribosomal protein S5 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsE PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.057e-25 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K D ++ +V VP+T+ + PH G GAAKVM+RPA+PGTGVIAGGAVR VLE+AGV N L KQLGS+N LNNARAT+ A+ ++ + EV+ ERGI Sbjct: 69 RKGVADGKKQLVEVPLTRSNSIPHPMIGRGGAAKVMMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQLGSDNPLNNARATLHALASLRTFSEVAGERGI 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_PHATR (30S ribosomal protein S5, chloroplastic OS=Phaeodactylum tricornutum GN=rps5 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.687e-25 Identity = 54/100 (54.00%), Postives = 78/100 (78.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ D R+N++ +P+TK L+ PH G+FGA KV++RP+ G+GVIAGGAVRIVLE+AGV+N + KQLGSNN LNNARA+V A+Q + +V+++R + Sbjct: 76 KKAKTDGRKNLIELPITKALSIPHNVAGNFGACKVIMRPSIEGSGVIAGGAVRIVLEVAGVKNVIAKQLGSNNLLNNARASVCALQNLTTKAQVAKKRNL 175
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNP6 (30S ribosomal protein S5 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsE PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.817e-25 Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T+ + PH S G+ GAA+V++RPA+PGTGVIAGGAVR VLE+AGV+N L K+LGS + LNNARA + A+ ++ ++EV++ R IP+ Sbjct: 75 RKGVADGKKHLVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIAGGAVRTVLELAGVKNVLAKRLGSKSPLNNARAALEALSSLRTFQEVAQSRDIPV 176
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNE7 (30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsE PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.817e-25 Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T+ + PH S G+ GAA+V++RPA+PGTGVIAGGAVR VLE+AGV+N L K+LGS + LNNARA + A+ ++ ++EV++ R IP+ Sbjct: 75 RKGVADGKKHLVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIAGGAVRTVLELAGVKNVLAKRLGSKSPLNNARAALEALSSLRTFQEVAQSRDIPV 176
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CYAA5 (30S ribosomal protein S5 OS=Cyanothece sp. (strain ATCC 51142) GN=rpsE PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.021e-24 Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = -1 Query: 192 KTKKEKVKDG-FEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 677 K+ ++K KD ++E +L FRAI V+K D ++ ++ V +TK + H + G G AKV++RPA+PGTGVIAGGAVR VLE+AG++N L KQLGSNN LNNARA + A++ ++ + EV++ERG+P+ Sbjct: 6 KSNRDKSKDSNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKQLIDVSLTKSSSITHVAKGVSGGAKVIVRPAAPGTGVIAGGAVRTVLELAGLKNILAKQLGSNNPLNNARAVINALEGLRTFSEVAQERGVPL 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_RHDSA (30S ribosomal protein S5, chloroplastic OS=Rhodomonas salina GN=rps5 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.021e-24 Identity = 55/100 (55.00%), Postives = 78/100 (78.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ D ++ IV+VP+TK + PH G GAAKV++RP++PG+GVIAGG+VR +LE+AGV+N L KQLGSNN LNNARA A+ K+K + +V+++RGI Sbjct: 67 KKAVSDGKKKIVSVPITKDSSIPHIVKGRSGAAKVIMRPSAPGSGVIAGGSVRTILELAGVKNILAKQLGSNNPLNNARAATDALLKLKTFSQVAQDRGI 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_CYAPA (30S ribosomal protein S5, cyanelle OS=Cyanophora paradoxa GN=rps5 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.333e-24 Identity = 53/100 (53.00%), Postives = 78/100 (78.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+A D ++++V VP+T+ + PH DG GAA+V++RP++ GTGVIAGGAVR VLE+AGV N L KQLGSNN LNNARA + A+ ++K + + +++RG+ Sbjct: 67 KKAAADGKKHVVEVPLTRSNSIPHPIDGIGGAARVIMRPSAEGTGVIAGGAVRTVLELAGVRNILAKQLGSNNPLNNARAAMNALSRLKTFSQFAKDRGV 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CYAP8 (30S ribosomal protein S5 OS=Cyanothece sp. (strain PCC 8801) GN=rpsE PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 53/102 (51.96%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++ ++ V +TK + H + G G AKV++RPA+PGTGVIAGGAVR VLE+AGV+N L KQLGS+N LNNARA + A++ ++ + EV++ERG+P+ Sbjct: 67 RKGVADGKKQLIDVSLTKASSITHITRGVSGGAKVIVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSSNPLNNARAVINALEGLRTFSEVAQERGVPL 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNS9 (30S ribosomal protein S5 OS=Synechococcus sp. (strain CC9902) GN=rpsE PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 50/102 (49.02%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ +E ++ERGI + Sbjct: 109 RKGVADGKKHLVKVPLTRHSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSSLRTHKETAKERGISL 210 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |