CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HYPNA (30S ribosomal protein S5 OS=Hyphomonas neptunium (strain ATCC 15444) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 45/100 (45.00%), Postives = 67/100 (67.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ +A+RN+V +P+ + T H +G GA KV+LR A PGTGVIAGG +R V+E+ GV++ +GK LGS+N N RAT A++ R V+ +RG+ Sbjct: 78 RKATEEAKRNLVRIPLREGRTLHHDGNGRHGAGKVVLRAAPPGTGVIAGGPMRAVMEVLGVQDVVGKSLGSSNPYNMVRATFDALKGQANPRTVASKRGL 177
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GRAFK (30S ribosomal protein S5 OS=Gramella forsetii (strain KT0803) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 44/101 (43.56%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K+ DA++N+V +P+ K T PH G +G A+VML PA+ GTG+IAGGA+R VLE GV + L K GS+N N +AT A+ +++ V+++RG+ + Sbjct: 69 KAVEDAKKNLVRIPLHKG-TLPHEQKGKYGGARVMLLPAAAGTGIIAGGAIRAVLESVGVHDVLSKNQGSSNPHNVVKATFDALLQLRSAETVAKQRGVSL 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THENN (30S ribosomal protein S5 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 45/100 (45.00%), Postives = 70/100 (70.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VP+ T PH G A++V+L+PA+PGTG+IAGG VR V+E+AG++N L K LGS N LN A AT+ ++++ R+V++ R I Sbjct: 65 RKAIADAKKNVIEVPVING-TIPHEVIGRQDASRVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKALGSTNPLNLAMATINGLKELLDPRKVAKLRDI 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STACT (30S ribosomal protein S5 OS=Staphylococcus carnosus (strain TM300) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 KSAVDA-RRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K AV+A ++++VTV + T PH G FG+ V+L+PA+PGTGVIAGG VR VLE+AG+ + L K LGSN +N RAT+ ++ +K EV++ RG Sbjct: 61 KKAVEAAKKDLVTVNRVEGTT-PHTITGRFGSGSVLLKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATLNGLENLKNAEEVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PELLD (30S ribosomal protein S5 OS=Pelodictyon luteolum (strain DSM 273) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N+V VP+ K T PH+ +G+AKV+++PA+PGTG+IAGGAVR VLEMAGV + L K LGS+N N +A ++ ++ + +V+ R Sbjct: 66 KGVEDGKKNVVKVPIIKG-TIPHQIVAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGVRDVLTKSLGSSNPHNVVKAAILGLKSISDANDVAERR 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACLS (30S ribosomal protein S5 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A++N++TVPM T PH + G FG K++L+PA G GV AGGAVR VLE+AGV + K LGSN +N RATV + ++K+ EV+ RG Sbjct: 64 RKAIEAAKKNLITVPMVG-ATLPHEALGVFGGGKILLKPAVEGAGVAAGGAVRAVLELAGVADVTSKSLGSNTPINVVRATVDGLTQLKRAEEVAALRG 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACLM (30S ribosomal protein S5 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A++N++TVPM T PH + G FG K++L+PA G GV AGGAVR VLE+AGV + K LGSN +N RATV + ++K+ EV+ RG Sbjct: 64 RKAIEAAKKNLITVPMVG-TTLPHEALGVFGGGKILLKPAVEGAGVAAGGAVRAVLELAGVADVTSKSLGSNTPINVVRATVDGLTQLKRAEEVAALRG 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FLAPJ (30S ribosomal protein S5 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K+ DA++N+V +P++ + PH G FG A+V L PAS GTGVIAGGAVR VLE G+ + L K GS+N N +AT A+ +M+ VSR+RGI + Sbjct: 69 KAVEDAKKNLVKIPLSGK-SVPHEQKGKFGGARVNLMPASHGTGVIAGGAVRSVLESVGIHDVLSKSQGSSNPHNVVKATFDALLQMRSAYTVSRQRGISL 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORGL (30S ribosomal protein S5 OS=Corynebacterium glutamicum GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H G+ A VML+PA+PGTGVIAGGA R VLE AG+++ L K LGS+NA+N ATV ++++ + EV+ RG Sbjct: 94 QKGAEEARKNFFRVPMVNG-TITHPVQGEKAAGIVMLKPAAPGTGVIAGGAARPVLECAGIQDILSKSLGSDNAINVVHATVDGLKQLVRPEEVAARRG 191
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORGB (30S ribosomal protein S5 OS=Corynebacterium glutamicum (strain R) GN=rpsE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H G+ A VML+PA+PGTGVIAGGA R VLE AG+++ L K LGS+NA+N ATV ++++ + EV+ RG Sbjct: 94 QKGAEEARKNFFRVPMVNG-TITHPVQGEKAAGIVMLKPAAPGTGVIAGGAARPVLECAGIQDILSKSLGSDNAINVVHATVDGLKQLVRPEEVAARRG 191 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |