CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_THAPS (30S ribosomal protein S5, chloroplastic OS=Thalassiosira pseudonana GN=rps5 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 51/98 (52.04%), Postives = 73/98 (74.49%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 +K+ D R+N++ VP+TK L+ PH GD GA K+++RP+ G+GVIAGGAVR VLE+AG++N + KQLGS+N LNNAR +VA++ + EV R+R Sbjct: 76 KKAKTDGRKNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLGSDNLLNNARTAIVALESLTTLDEVKRKR 173
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNPW (30S ribosomal protein S5 OS=Synechococcus sp. (strain WH7803) GN=rpsE PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23 Identity = 50/102 (49.02%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ +E ++ERGI + Sbjct: 109 RKGVADGKKHLVKVPLTRHNSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALDSLRTHKETAKERGISL 210
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROMS (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain AS9601) GN=rpsE PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++N+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + VSRERGI + Sbjct: 100 RKGVSDGKKNLVRVPLTPNNSIPTLSLGSDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSVSRERGISL 201
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROMM (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT 9313) GN=rpsE PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 50/102 (49.02%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ +E ++ERGI + Sbjct: 103 RKGVADGKKHLVKVPLTRHNSIPTLSNGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALASLRTHKETAKERGISL 204
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROM3 (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT 9303) GN=rpsE PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 50/102 (49.02%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ +E ++ERGI + Sbjct: 104 RKGVADGKKHLVKVPLTRHNSIPTLSNGREGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALASLRTHKETAKERGISL 205
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNSC (30S ribosomal protein S5 OS=Synechococcus sp. (strain CC9605) GN=rpsE PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 50/102 (49.02%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ +E ++ERGI + Sbjct: 108 RKGVADGKKHLVKVPLTRHNSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSLLRTHKETAKERGISL 209
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNPX (30S ribosomal protein S5 OS=Synechococcus sp. (strain WH8102) GN=rpsE PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 50/102 (49.02%), Postives = 77/102 (75.49%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ +E ++ERGI + Sbjct: 109 RKGVADGKKHLVKVPLTRHNSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSLLRTHKETAKERGISL 210
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_EMIHU (30S ribosomal protein S5, chloroplastic OS=Emiliania huxleyi GN=rps5 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.515e-23 Identity = 49/89 (55.06%), Postives = 70/89 (78.65%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K D ++N++TVP+T + PH+ +G FGAAK++LRP++PG GVIAGGA RIVLE+AG++N L KQLGSN+ LNNARAT+ + ++ Sbjct: 67 RKGVTDGKKNVITVPLTSSNSIPHKINGRFGAAKLVLRPSAPGCGVIAGGAPRIVLELAGIKNILSKQLGSNSLLNNARATIDGLSNLR 155
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROM9 (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT 9312) GN=rpsE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++N+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + SRERGI + Sbjct: 101 RKGVSDGKKNLVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASRERGISL 202
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROM2 (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT 9215) GN=rpsE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++N+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + SRERGI + Sbjct: 100 RKGVSDGKKNLVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASRERGISL 201 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |