CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GLOVI (30S ribosomal protein S5 OS=Gloeobacter violaceus GN=rpsE PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23 Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K DAR+ ++ VP+ K + PH G GAA V L+PAS GTGVIAGGAVR VLE+AG++N L K LGS + LNNARA A+ +++ EV+ ERG+P+ Sbjct: 116 KKGVSDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGSKSPLNNARAAADALSRLRTLSEVAGERGVPV 217
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MICAN (30S ribosomal protein S5 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23 Identity = 51/100 (51.00%), Postives = 75/100 (75.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K D ++ ++ V +TK + H + G G A+V++RPA+PGTGVIAGGAVR VLE+AGV+N L KQLGS+N LNNARA V A++ ++ + EV+++RG+ Sbjct: 67 RKGVADGKKQLIEVSLTKASSITHLTRGASGGAQVIMRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSDNPLNNARAAVNALETLRTFSEVAKDRGV 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROMT (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain NATL2A) GN=rpsE PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23 Identity = 49/102 (48.04%), Postives = 76/102 (74.51%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T+ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + ++ERGI + Sbjct: 102 RKGVADGKKHLVRVPLTRNSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSELRTHKATAKERGISL 203
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROM1 (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain NATL1A) GN=rpsE PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23 Identity = 49/102 (48.04%), Postives = 76/102 (74.51%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T+ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + ++ERGI + Sbjct: 102 RKGVADGKKHLVRVPLTRNSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSELRTHKATAKERGISL 203
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROMP (30S ribosomal protein S5 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rpsE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22 Identity = 51/102 (50.00%), Postives = 74/102 (72.55%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + SRERGI + Sbjct: 100 RKGVSDGKKHLVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASRERGISL 201
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROMA (30S ribosomal protein S5 OS=Prochlorococcus marinus GN=rpsE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22 Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++N+V VP+T + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ ++ + ++ERGI + Sbjct: 105 RKGVADGKKNLVRVPLTPNSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSLLRTHKATAKERGISL 206
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROM5 (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT 9515) GN=rpsE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22 Identity = 51/102 (50.00%), Postives = 74/102 (72.55%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + SRERGI + Sbjct: 100 RKGVSDGKKHLVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASRERGISL 201
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROM0 (30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT 9301) GN=rpsE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22 Identity = 51/102 (50.00%), Postives = 74/102 (72.55%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++N+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA+ +++ + S+ERGI + Sbjct: 100 RKGVSDGKKNLVRVPLTPNNSIPTLSLGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASKERGISL 201
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNR3 (30S ribosomal protein S5 OS=Synechococcus sp. (strain RCC307) GN=rpsE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 49/102 (48.04%), Postives = 76/102 (74.51%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++++V VP+T+ + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LGS LNNARA +VA++ ++ ++ ++ERGI + Sbjct: 112 KKGVADGKKHLVKVPLTRSNSIPTISTGRDGAASVLMRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNNARAAMVALRDLRTHQDTAKERGITL 213
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PELTS (30S ribosomal protein S5 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rpsE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K DA++N++ VP+ T PH G+FGA KV+L+PA+PGTGVIAGG VR +LE+AGV + L K LGSNNA N RAT+ A++ +K EV+R RG P+ Sbjct: 61 RKGIEDAKKNMIKVPLAG-TTIPHEVIGEFGAGKVLLKPAAPGTGVIAGGPVRAILELAGVRDILTKSLGSNNANNMVRATIEALKSLKTPEEVARLRGKPV 161 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |