CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_ODOSI (30S ribosomal protein S5, chloroplastic OS=Odontella sinensis GN=rps5 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.631e-22 Identity = 48/100 (48.00%), Postives = 72/100 (72.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ D R+N++ +P+TK L+ PH G FGA K+++RP+ G+GVIAGG+VR VLE+AG++N + KQLGSNN LNNARA V + + +V ++R + Sbjct: 76 KKAKADGRKNLIKIPITKSLSIPHNVIGIFGACKIIMRPSIEGSGVIAGGSVRTVLEVAGIKNVIAKQLGSNNVLNNARAAVSGLNNLTTKSQVLKKRDL 175
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_GUITH (30S ribosomal protein S5, chloroplastic OS=Guillardia theta GN=rps5 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 46/102 (45.10%), Postives = 73/102 (71.57%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ D R+N++ +P+T + PH G GAAKV+++P++PG+GVIAGG+VR +LE+AG++N L KQLGS+N LNNARA A+ ++ + V +R + + Sbjct: 67 KKAVTDGRKNLINIPLTNQNSIPHIVQGYSGAAKVIIKPSAPGSGVIAGGSVRTILELAGIKNILAKQLGSSNPLNNARAAANALINLRTYTSVLNDRNLDL 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_GRATL (30S ribosomal protein S5, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rps5 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 61/163 (37.42%), Postives = 90/163 (55.21%), Query Frame = -1 Query: 198 KKEKVKD-----GFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 671 KK+ +KD +EE +L FRAI V+K DA+++I+ VP+TK + PH +G GAAKV+LRP++ G+GVIAGG+ R VLE+AGV+N L KQL S+N LNNARA + A+ +++ ++ ++ R I Sbjct: 2 KKKSIKDKEQENNWEEKVVQVKRVTKVVKGGKKLSFRAILIVGNEKGEIGVGIGKASDVIGAVKKGVTDAKKHIINVPLTKSYSIPHPIEGISGAAKVILRPSAIGSGVIAGGSTRTVLELAGVKNILAKQLRSSNTLNNARAVLNALSQLRTFQNTAQNRDI 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYMTH (30S ribosomal protein S5 OS=Symbiobacterium thermophilum GN=rpsE PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.074e-21 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K DA+++++ +P+ T PH G FGA KV+L+PASPGTGVIAGGAVR VLE AGV + L K LGSNNA N AT+ ++++K EV++ RG P+ Sbjct: 61 RKGTEDAKKHMIKIPLNG-TTIPHEVIGRFGAGKVLLKPASPGTGVIAGGAVRAVLEAAGVRDILTKSLGSNNAANQVLATLAGLRQLKSAEEVAKLRGKPV 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THETN (30S ribosomal protein S5 OS=Thermoanaerobacter tengcongensis GN=rpsE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.602e-20 Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ DA+++++ VP+ T PH G+FGA KV+L+PA GTGVIAGG VR VLE AG+ + L K LGS+NA N AT+ ++++K EV+R RGIP+ Sbjct: 62 RKAIEDAKKHLIKVPVVG-TTIPHEVIGEFGAGKVLLKPAREGTGVIAGGPVRAVLESAGIRDVLSKSLGSSNATNMVYATIEGLKRLKTAEEVARLRGIPV 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACHD (30S ribosomal protein S5 OS=Bacillus halodurans GN=rpsE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.602e-20 Identity = 50/99 (50.51%), Postives = 71/99 (71.72%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ T PH G FGA +V+L+PAS GTGVIAGG VR VL++AGV + L K LGSNN +N RATV +Q++K+ +V++ RG Sbjct: 61 RKAVEDAKKNLIEVPIVG-TTIPHEIVGRFGAGRVLLKPASEGTGVIAGGPVRAVLDLAGVGDILSKSLGSNNPINMVRATVKGLQELKRAEDVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLT3 (30S ribosomal protein S5 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rpsE PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.439e-20 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K DA++N++ VP+ K T PH+ FGAAKV+++PA+PGTG+IAGGAVR VLEMAGV++ L K LGS+N N +ATV +Q++ +VS RG Sbjct: 67 KGIEDAKKNVIEVPIIKG-TIPHQIFAKFGAAKVLMKPATPGTGLIAGGAVRAVLEMAGVKDVLTKSLGSSNPHNVVKATVHGLQEVSDAYDVSERRG 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HELMI (30S ribosomal protein S5 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rpsE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N++ VP+ T PH + G FGA +V+L+PAS GTGVIAGG VR VLE+AG+ + L K LGSNNA N RAT+ ++ +K+ EV++ RG Sbjct: 61 RKGVEDAKKNLIVVPVVG-TTIPHPALGVFGAGRVLLKPASKGTGVIAGGPVRAVLELAGIHDILTKSLGSNNANNMVRATMEGLRSLKRAEEVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACSK (30S ribosomal protein S5 OS=Bacillus clausii (strain KSM-K16) GN=rpsE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ T PH+ G FGA +V L+PAS GTGVIAGG VR VLE+AG+ + L K LGS+N +N RAT+ + +K+ EV++ RG Sbjct: 61 RKAVEDAKKNLIEVPIVN-TTIPHQIVGRFGAGRVFLKPASEGTGVIAGGPVRAVLELAGIGDVLSKSLGSSNPINMVRATITGLTNLKRAEEVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CARHZ (30S ribosomal protein S5 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rpsE PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N++ VP+ T PH G+ GA KV+L+PA+PGTGVIAG AVR +LEMAGV + L K LGSNN N A AT+ A++ +K V++ RG Sbjct: 61 RKGIEDAKKNLIKVPIVN-TTIPHEIIGEAGAGKVLLKPAAPGTGVIAGSAVRAILEMAGVRDILTKSLGSNNPHNMAHATIEALKSLKTVEMVAKLRG 158 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |