CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHRSD (30S ribosomal protein S5 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN+V V ++ T + GA+KV ++PAS GTG+IAGGA+R VLE+AGV + L K GS N +N RAT+ + M+ +++ +RG+ Sbjct: 61 QKAMDQARRNMVKVSLSG-ATLQYPVKARHGASKVFMQPASEGTGIIAGGAMRSVLELAGVHDVLAKCYGSTNPVNVVRATIKGLASMQSPEDIAAKRGM 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BORAP (30S ribosomal protein S5 OS=Borrelia afzelii (strain PKo) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +KS AR+N+ V + K T PH G F AKV+++PA+ GTGVIAGG VR V+E GV + L K LGSNN++N +AT A + +V+ RG Sbjct: 60 KKSLTSARKNLRFVSIRKG-TLPHEVIGCFKKAKVLIKPATHGTGVIAGGPVRAVMEALGVHDILSKSLGSNNSMNVVKATFKAFDLVLNAEKVAEMRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ALCBS (30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + T H GA+KV ++PA GTGVIAGGA+R VLE+AGV+N L K GS N +N RAT ++ M V+ +RG Sbjct: 62 QKALEAARRNMIQVELNG-TTIQHPMKARHGASKVYMQPADEGTGVIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVRATFNGLKSMASPESVAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACIAD (30S ribosomal protein S5 OS=Acinetobacter sp. (strain ADP1) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K+ ARRN++TV + T H + GA++V ++PAS GTGVIAGGA+R VLE AGV N L K GS NA N AT ++ M +V+ +RG+ Sbjct: 61 KALEAARRNMITVDLAG-TTLQHPVNARHGASRVYMQPASEGTGVIAGGAMRAVLEAAGVHNVLAKCYGSTNAANVVNATFKGLRDMTSPEKVAAKRGL 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SILST (30S ribosomal protein S5 OS=Silicibacter sp. (strain TM1040) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ VP+ + T H G GA KV++R A GTG+IAGG +R V EM G+++ + K +GS N N RAT+ ++K + R V++ RG Sbjct: 70 RKATEQAKRQMIRVPLKEGRTLHHDMYGRHGAGKVVMRTAPEGTGIIAGGPMRAVFEMLGIKDVVSKSVGSQNPYNMIRATIDGLKKEQSPRSVAQRRG 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_POLSQ (30S ribosomal protein S5 OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR ++ V + K T H G GA++V++ PA GTG+IAGG +R + ++ GV N + K LGS N N RAT+ + KM E++ +RG Sbjct: 67 QKAMDEARRKMIKVTLRKG-TLQHTVTGQHGASRVLISPAKDGTGIIAGGPMRAIFDVMGVTNVVAKSLGSTNPYNLVRATIDGLSKMSTPAEIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PHOLL (30S ribosomal protein S5 OS=Photorhabdus luminescens subsp. laumondii GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN+ TV + T H G ++V ++PA GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMKTVALNSG-TLYHPVKGAHTGSRVFMQPAHEGTGIIAGGAMRAVLEVAGVRNVLAKTYGSTNPINVVRATLDALDSMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACJO (30S ribosomal protein S5 OS=Lactobacillus johnsonii GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = -1 Query: 204 AKKTSAFGKTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 701 A + + ++K++ KD E+ +++F A+ ++K+ ++ ++ VP T T PH G +G+ +ML+PA G+GV AGGAVRI++++AG+ + K LGSN +N RAT+ + K+K +V + R Sbjct: 2 ANRNDSRRDSRKDRKKDDIEDQLVAINRITKVVKGGRRMRFAAVVIVGDRKGHVGFGTGKAQEVPEAIRKAVEAGKKRMIKVP-TVGTTIPHEVMGHYGSGNIMLKPAEAGSGVAAGGAVRIIMDLAGISDVTSKSLGSNTPINVIRATMDGLSKLKTREDVLKLR 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACGA (30S ribosomal protein S5 OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = -1 Query: 204 AKKTSAFGKTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 701 A + + ++K++ KD E+ +++F A+ ++K+ ++ ++ VP T T PH G +G+ +ML+PA G+GV AGGAVRI++++AG+ + K LGSN +N RAT+ + K+K +V + R Sbjct: 2 ANRNDSRRDSRKDRKKDDIEDQLVAINRITKVVKGGRRMRFAAVVIVGDRKGHVGFGTGKAQEVPEAIRKAVEAGKKRMIKVP-TVGTTIPHEVMGHYGSGNIMLKPAEAGSGVAAGGAVRIIMDLAGISDVTSKSLGSNTPINVIRATMDGLSKLKTREDVLKLR 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLCV (30S ribosomal protein S5 OS=Chlamydophila caviae GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 36/100 (36.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K AR+N++T+ + + PH D A+++L+PA GTG++AG +R++LEMAGV+N + K LGSNN +N +A A+ + ++V + R + Sbjct: 63 RKGGEAARKNLITIESLESGSIPHEVLVDQDGAQLLLKPAKSGTGIVAGSRIRLILEMAGVKNIVAKSLGSNNPMNQVKAAFKALLSLSSRKDVLQRRRV 162 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |