CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACIB3 (30S ribosomal protein S5 OS=Acinetobacter baumannii (strain AB307-0294) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = -1 Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K+ ARRN++TV + T H + GA++V ++PAS GTGVIAGGA+R VLE AGV N L K GS NA N AT ++ M +V+ +RG Sbjct: 61 KALEAARRNMITVDLAG-TTLQHPVNARHGASRVYMQPASEGTGVIAGGAMRAVLEAAGVHNVLAKCYGSTNAANVVNATFKGLRDMTSPEKVAAKRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNAS (30S ribosomal protein S5 OS=Syntrophus aciditrophicus (strain SB) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K A++++ + + K T P+ G FGA +V+L+PAS GTG+IAGGAVR VLE+AG+ N L K LGS+N N +AT+ + +++ ++ RG Sbjct: 61 RKGMEQAKKSMTKIEIEKG-TIPYEVIGKFGAGRVLLKPASEGTGLIAGGAVRAVLEVAGIHNILTKCLGSHNPHNLVKATIEGLCRLESPGRIAASRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SILPO (30S ribosomal protein S5 OS=Silicibacter pomeroyi GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ V + + T H +G GA KV++R A GTG+IAGG +R V EM GV++ + K LGS N N RAT+ ++K + R V++ RG Sbjct: 71 RKATEQAKRQMIRVQLREGRTLHHDIEGRHGAGKVVMRAAPEGTGIIAGGPMRAVFEMLGVKDVVSKSLGSANPYNMIRATIDGLKKEQSPRSVAQRRG 169
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSYWF (30S ribosomal protein S5 OS=Psychrobacter sp. (strain PRwf-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ A+RN++TV + T H GA+KV ++PA+ GTGVIAGGAVR VLE AGVEN L K GS N N RAT ++ M + + +RG Sbjct: 60 QKALEAAKRNMITVDLDG-ATLQHPIIARHGASKVYMQPANEGTGVIAGGAVRAVLESAGVENVLTKCYGSTNPTNVVRATFNGLRDMSSPEKAAAKRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DICNV (30S ribosomal protein S5 OS=Dichelobacter nodosus (strain VCS1703A) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ A++N+VT+ + K T H G GAA+V ++PAS GTG+IAGGA+R V ++ GV++ L K G+ N N RAT+ A+ M +V+ +RG Sbjct: 63 QKAMDQAKKNLVTIALNKD-TLQHAITGHHGAARVFMQPASEGTGIIAGGAMRAVFDVVGVKDVLAKCQGTRNPGNVIRATINALTSMATPEKVAAKRG 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_AQUAE (30S ribosomal protein S5 OS=Aquifex aeolicus GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K A++N++ VP+ T PH G FGA K+++ PA GTGV+AGGA + V E+AG + L K +GS N N RA A+ ++K +++ ERG+P+ Sbjct: 79 KGIEKAKKNVIRVPIVDG-TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGSTNPDNVVRAVFDALLQLKTPEQIAEERGLPV 178
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SINMW (30S ribosomal protein S5 OS=Sinorhizobium medicae (strain WSM419) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+R+++ VP+ T H G GA KV+LR A PGTG+IAGG +R V E GV + + K GS+N N RAT A++ ++++ +RG+ Sbjct: 72 RKATEAAKRDLIFVPLRGGRTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHDVVAKSTGSSNPYNMVRATFDALKNQMHPKDIAAQRGM 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHIME (30S ribosomal protein S5 OS=Rhizobium meliloti GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+R+++ VP+ T H G GA KV+LR A PGTG+IAGG +R V E GV + + K GS+N N RAT A++ ++++ +RG+ Sbjct: 72 RKATEAAKRDLIFVPLRGGRTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHDVVAKSTGSSNPYNMVRATFDALKNQMHPKDIAAQRGM 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEPF (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN++ V + T + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG+ Sbjct: 62 QKAMEAARRNMIQVDLNG-TTLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGL 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEFS (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN++ V + T + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG+ Sbjct: 62 QKAMEAARRNMIQVDLNG-TTLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGL 160 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |