CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACP2 (30S ribosomal protein S5 OS=Bacillus pumilus (strain SAFR-032) GN=rpsE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VPM T PH G FGA V+L+PAS GTGVIAGG VR VLE+AG+ + L K LGSN +N RAT+ + ++K+ +V++ RG Sbjct: 61 RKAVEDAKKNLIEVPMVG-TTIPHEIIGRFGAGNVLLKPASEGTGVIAGGPVRAVLELAGLADILSKSLGSNTPINMIRATLQGLSELKRAEDVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACCN (30S ribosomal protein S5 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rpsE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ + PH G FGA +V L+PA+ GTGVIAGG VR VLE+AGV++ L K LGSN +N RATV + ++K+ EV++ RG Sbjct: 61 RKAIEDAKKNLIEVPLVG-TSIPHEIIGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLGSNTPINMIRATVNGLSELKRAEEVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCS2 (30S ribosomal protein S5 OS=Mycobacterium smegmatis GN=rpsE PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +AR+N VP+ T H G+ A VMLRPASPGTGVIAGGA R VLE AGV + L K LGS+NA+N ATV A++ +++ EV+ RG+P+ Sbjct: 87 KGVEEARKNFFRVPLIGS-TITHPVQGEAAAGVVMLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPI 186
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRGG (30S ribosomal protein S5 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A++N VP + T PH G+ A V+L+PASPGTGVIAGG VR VLE AGV + L K LGS+NA+N ATV A+Q +++ E++ RG+P+ Sbjct: 85 KGVEEAKKNFFKVPRIQG-TIPHPITGEKAAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDILSKSLGSSNAINIVHATVAALQGLQRPEEIAARRGLPL 184
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOSR (30S ribosomal protein S5 OS=Rhodococcus sp. (strain RHA1) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 QK +AR++ VPM T H G+ A VMLRPASPGTGVIAGGAVR VLE AG+ + L K LGS+NA+N ATV A++ +++ EV+ RG+ + Sbjct: 99 QKGVEEARKSFFRVPMIGS-TITHPVQGEAAAGVVMLRPASPGTGVIAGGAVRAVLECAGIHDILSKSLGSDNAINVVHATVAALKGLQRPEEVAARRGLAL 199
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOOB (30S ribosomal protein S5 OS=Rhodococcus opacus (strain B4) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 QK +AR++ VPM T H G+ A VMLRPASPGTGVIAGGAVR VLE AG+ + L K LGS+NA+N ATV A++ +++ EV+ RG+ + Sbjct: 99 QKGVEEARKSFFRVPMIGS-TITHPVQGEAAAGVVMLRPASPGTGVIAGGAVRAVLECAGIHDILSKSLGSDNAINVVHATVAALKGLQRPEEVAARRGLAL 199
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRSV (30S ribosomal protein S5 OS=Streptococcus sanguinis (strain SK36) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VPM T PH +FG AKV+L+PA G+GV AGGAVR V+E+AGV + K LGSN +N RATV ++++K+ EV+ RGI Sbjct: 60 RKAVEDAKKNLIEVPMVG-TTIPHEVLSEFGGAKVLLKPAVEGSGVAAGGAVRAVIELAGVADVTSKSLGSNTPINIVRATVEGLKQLKRAEEVAALRGI 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRGC (30S ribosomal protein S5 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VPM T PH +FG AKV+L+PA G+GV AGGAVR V+E+AGV + K LGSN +N RATV ++++K+ EV+ RGI Sbjct: 60 RKAVEDAKKNLIEVPMVG-TTIPHEVLSEFGGAKVLLKPAVEGSGVAAGGAVRAVIELAGVADVTSKSLGSNTPINIVRATVEGLKQLKRAEEVAALRGI 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOE4 (30S ribosomal protein S5 OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 QK +AR++ VPM T H G+ A VMLRPASPGTGVIAGGAVR VLE AG+ + L K LGS+NA+N ATV A++ +++ EV+ RG+ + Sbjct: 103 QKGVEEARKSFFRVPMIAN-TITHPVQGEAAAGIVMLRPASPGTGVIAGGAVRAVLECAGIADILSKSLGSDNAINVVHATVAALKGLQRPEEVAARRGLTL 203
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCGI (30S ribosomal protein S5 OS=Mycobacterium gilvum (strain PYR-GCK) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +AR+N VP+ T H G+ A VMLRPASPGTGVIAGGA R VLE AGV + L K LGS+NA+N ATV A++ +++ EV+ RG+P+ Sbjct: 95 KGVEEARKNFFRVPLIGG-TVTHPVQGEAAAGVVMLRPASPGTGVIAGGACRAVLECAGVHDVLAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPI 194 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |