CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LYSSC (30S ribosomal protein S5 OS=Lysinibacillus sphaericus (strain C3-41) GN=rpsE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 47/99 (47.47%), Postives = 69/99 (69.70%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N+V VP T PH G FGA +++++PA+PGTGVIAGG VR VLE+AG+ + L K LGSN +N RATV + ++K+ +V++ RG Sbjct: 62 RKAVEDAKKNLVEVPRVGGTT-PHLVLGRFGAGEILIKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATVQGLTELKRVEDVAKLRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_KINRD (30S ribosomal protein S5 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.436e-18 Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A++N VP + T PH G+ A VMLRPASPGTGVIAGG VR VLE AG+ + L K LGS+NA+N AT+ A++ +++ +V+ RG+P+ Sbjct: 101 KGVEEAKKNFFRVPRIQG-TIPHPIQGEKAAGVVMLRPASPGTGVIAGGPVRAVLECAGIHDVLSKSLGSDNAINIVHATIEALRGLERPEQVAARRGLPV 200
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESHD (30S ribosomal protein S5 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.436e-18 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N+V+VP+ T PH G++GA V+L+PA+ GTGVIAGGAVR VLE+AGV + L K LGS N N AT+ A++ +K+ +V+R RG Sbjct: 61 RKGMEDAKKNMVSVPLIG-TTIPHAILGNYGAGSVLLKPAAKGTGVIAGGAVRAVLEVAGVSDILTKSLGSANPHNMVNATMAALKSLKRAEDVARLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PELPD (30S ribosomal protein S5 OS=Pelobacter propionicus (strain DSM 2379) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.181e-18 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K A++N++ VP+ + T P +G FGA +++++PAS GTGVIAGGA R + E AG+ N L K LGSNN N +A +Q++K E++ RGI Sbjct: 61 RKGVEQAKKNLIKVPVNQNQTIPFEIEGKFGAGRLLMKPASAGTGVIAGGAARAIFEAAGINNILSKCLGSNNPHNVVKAAFAGLQRLKSPEELAARRGI 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GEOKA (30S ribosomal protein S5 OS=Geobacillus kaustophilus GN=rpsE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.181e-18 Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ T PH G FGA +++L+PAS GTGVIAGG R VLE+AG+ + L K +GSN +N RAT ++++K+ +V+R RG Sbjct: 61 RKAIEDAKKNLIEVPIVG-TTIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRAEDVARLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESRM (30S ribosomal protein S5 OS=Desulfotomaculum reducens (strain MI-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.181e-18 Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N++ VP+ T H+ G FGA KV+++PA+ GTGVIAGG VR +LE+AGV + L K LG+NNA N AT+ ++++K EV+R RG Sbjct: 61 RKGIEDAKKNMIKVPLNG-TTITHQIQGRFGAGKVLMKPAAKGTGVIAGGPVRAILELAGVRDILTKSLGTNNANNMVNATMEGLKQLKTPEEVARLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORK4 (30S ribosomal protein S5 OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.181e-18 Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H G+ A VMLRPA+PGTGVIAGGA R VLE AG+++ L K LGS+NA+N ATV A++++ + EV+ RG Sbjct: 95 QKGAEEARKNFFRVPMIAG-TITHPVQGEAAAGIVMLRPAAPGTGVIAGGATRPVLECAGIQDVLSKSLGSDNAINVVHATVDALKQLVRPEEVAARRG 192
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRR6 (30S ribosomal protein S5 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18 Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VPM T PH +FG AKV+L+PA G+GV AGGAVR V+E+AGV + K LGSN +N RATV ++++K+ E++ RGI Sbjct: 60 RKAVDDAKKNLIEVPMVG-TTIPHEVLSEFGGAKVLLKPAVEGSGVAAGGAVRAVVELAGVADITSKSLGSNTPINIVRATVEGLKQLKRAEEIAALRGI 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRPN (30S ribosomal protein S5 OS=Streptococcus pneumoniae GN=rpsE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18 Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VPM T PH +FG AKV+L+PA G+GV AGGAVR V+E+AGV + K LGSN +N RATV ++++K+ E++ RGI Sbjct: 60 RKAVDDAKKNLIEVPMVG-TTIPHEVLSEFGGAKVLLKPAVEGSGVAAGGAVRAVVELAGVADITSKSLGSNTPINIVRATVEGLKQLKRAEEIAALRGI 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRP2 (30S ribosomal protein S5 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18 Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VPM T PH +FG AKV+L+PA G+GV AGGAVR V+E+AGV + K LGSN +N RATV ++++K+ E++ RGI Sbjct: 60 RKAVDDAKKNLIEVPMVG-TTIPHEVLSEFGGAKVLLKPAVEGSGVAAGGAVRAVVELAGVADITSKSLGSNTPINIVRATVEGLKQLKRAEEIAALRGI 158 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |