CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCPA (30S ribosomal protein S5 OS=Mycobacterium paratuberculosis GN=rpsE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +AR+ VP+ + T H G+ A V+LRPASPGTGVIAGGA R VLE AGV + L K LGS+NA+N ATV A++ +++ EV+ RG+P+ Sbjct: 95 KGVEEARKGFFRVPLIRG-TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPI 194
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLL2 (30S ribosomal protein S5 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=rpsE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18 Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N++ VP+ K T PH+ +G+AKV+++PA+PGTG+IAGGAVR VLEMAGV + L K LGS+N N +A + +Q M EV+ R Sbjct: 67 KGVEDGKKNVIKVPIVKG-TIPHQVIAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGVHDVLTKSLGSSNPHNVVKAAIKGLQSMSDALEVAERR 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORJK (30S ribosomal protein S5 OS=Corynebacterium jeikeium (strain K411) GN=rpsE PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.426e-18 Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H G+ A VM++PA+PGTGVIAGGAVR VLE AGV++ L K LGS+NA+N ATV ++++ + EV+ RG Sbjct: 95 QKGAEEARKNFFRVPMING-TITHPVQGEDAAGIVMMKPAAPGTGVIAGGAVRPVLECAGVQDILSKSLGSDNAINIVHATVAGLKQLVRPEEVAARRG 192
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BEUC1 (30S ribosomal protein S5 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rpsE PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.426e-18 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A++N VP + T PH G+ A V LRPASPGTGVIAGG VR VL+ AG+ + L K LGS+NA+N ATV A+Q +++ V+ RG+P+ Sbjct: 99 KGVEEAKKNFFRVPRIQG-TIPHSVRGEAAAGVVFLRPASPGTGVIAGGPVRAVLDCAGIHDVLSKSLGSSNAINIVHATVAALQGLEEPAAVAARRGLPL 198
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCA9 (30S ribosomal protein S5 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=rpsE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18 Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +AR+N VP+ T H G+ A VMLRPAS GTGVIAGGA R VLE AGV + L K LGS+NA+N ATV A++++++ EV+ RG+P+ Sbjct: 96 KGVDEARKNFFRVPLIGG-TITHPVQGEDSAGVVMLRPASAGTGVIAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKQLQRPEEVAARRGLPI 195
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORDI (30S ribosomal protein S5 OS=Corynebacterium diphtheriae GN=rpsE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18 Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H G+ A VM+RPA+PGTGVIAGGA R VLE AGV++ L K LGS+NA+N ATV ++++ + EV+ RG Sbjct: 91 QKGAEEARKNFFRVPMVAG-TITHPVQGEAAAGIVMMRPAAPGTGVIAGGAARPVLECAGVQDILCKSLGSDNAINVVHATVAGLKQLNRPEEVAARRG 188
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLPD (30S ribosomal protein S5 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=rpsE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N++ VP+ K T PH+ +G+AKV+++PA+PGTG+IAGGAVR VLEMAG+ + L K LGS+N N +A + +Q M EV R Sbjct: 67 KGVEDGKKNVIKVPIVKG-TIPHQIIAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGIHDVLTKSLGSSNPHNVVKAAIKGLQSMSDAYEVGERR 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACST (30S ribosomal protein S5 OS=Bacillus stearothermophilus GN=rpsE PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18 Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ T PH G FGA +++L+PAS GTGVIAGG R VLE+AG+ + L K +GSN +N RAT ++++K+ +V++ RG Sbjct: 61 RKAIEDAKKNLIEVPIVG-TTIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRAEDVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_CYAME (30S ribosomal protein S5, chloroplastic OS=Cyanidioschyzon merolae GN=rps5 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18 Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = -1 Query: 240 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ 494 K+ VDA++ ++ + +T + H S G F AA V L+PA+ G+GVIAGGAVR V+E+AG++N L KQLG +N LNNA+A ++A++ Sbjct: 62 KAVVDAKKQLINITLTPTNSIVHASQGRFSAAVVFLKPAASGSGVIAGGAVRSVMELAGIQNVLSKQLGGSNPLNNAKAALLALK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THETH (30S ribosomal protein S5 OS=Thermus thermophilus GN=rpsE PE=1 SV=4) HSP 1 Score: 90.8929 bits (224), Expect = 9.255e-18 Identity = 47/98 (47.96%), Postives = 69/98 (70.41%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 QK+ ARRN+V VP+ T PH + +FGA+K++L+PA+PGTGVIAG R +LE+AGV + L K+LGS N +N A AT+ A+++++ +V R R Sbjct: 56 QKAGYYARRNMVEVPLQNG-TIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLR 152 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |