EY665590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 5.103e-26 Identity = 74/171 (43.27%), Postives = 97/171 (56.73%), Query Frame = 2 Query: 146 GAATSDPNTSFFGTT*KKATSKIPPSNGPSASFN---ITAEDYDN-HQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNP 646 GA S P T+F G KK + +G S++ N + A++ D QT DRW G AYD SDDQQDITR KG VDSLF P TH AV+ SY+Y+S+GLRTY+ ++T+ YIA A MD LV I+KNFM +K L + G + + L + +M NP Sbjct: 10 GAPASTP-TNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVF--AKMGINP 177
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.320e-25 Identity = 71/161 (44.10%), Postives = 90/161 (55.90%), Query Frame = 2 Query: 275 QTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNPNYYEMPVKWERGKGSKTPFN*IRQKFPGGKIGTNLGK 757 QT DRW G AYD SDDQQDITR KG VDSLF PM TH A++ SY+YIS+GLR Y+ ++T+D LYIA A MD L+ +AKNFM +K L + G + + L + +M NP M E G+ P IRQ++ N GK Sbjct: 53 QTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVF--AKMGINP---IMMSAGELESGNGEPAKLIRQRYREAADIINKGK 208
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.064e-23 Identity = 67/143 (46.85%), Postives = 84/143 (58.74%), Query Frame = 2 Query: 146 GAATSDPN-TSFFGTT*KKA-TSKIPPSNGPSASFN-----ITAEDYDN-HQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 GA S P +SF G K S +G S+S N + A++ D QT DRW G AYD SDDQQDITR KG VD+LF PM TH AV+ SYDYIS+G ++YN ++ +D YIA MD LV ++KNFM +K Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIK 152
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.390e-23 Identity = 62/138 (44.93%), Postives = 82/138 (59.42%), Query Frame = 2 Query: 146 GAATSDPNTSFFGTT*KKATSKIPPSNGPSAS---FNITAEDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 GA S P T+F G KK + +G S+ F + A + + + D+W G AYD SDDQQDITR KG VDSLF P TH AV+ SY+Y+S+GLR Y+ ++T+ YIA A MD LV ++KNFM +K Sbjct: 10 GAPASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIK 146
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.438e-20 Identity = 56/138 (40.58%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKATSKIPPSNGPSASFNITAEDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 +GS A S P + F G++ KK T+ PS+ + S + A + N + D+W A D SDDQ DI R KG VDSLF P TH + S++Y S+GLR Y++++ + YIA A MD LV I KNF+ +K Sbjct: 19 NGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE--NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIK 154 The following BLAST results are available for this feature:
BLAST of EY665590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665590 ID=EY665590; Name=EY665590; organism=Citrus sinensis; type=EST; length=790bpback to top |