EY665587

Overview
NameEY665587
Unique NameEY665587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665587 vs. ExPASy Swiss-Prot
Match: GLT1_SCHPO (Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe GN=SPAPB1E7.07 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.939e-23
Identity = 60/149 (40.27%), Postives = 80/149 (53.69%), Query Frame = 3
Query:   84 LNITFIGSAGQSFARFLTPEMNIHLIGEANDYAAKGMTAGEAG*TPVDTTGFWPEETTIVRNTCLYEATGGLILVKRKAGYRFAEENSLATSLVEGTGDR*CEYMTGGCVDELGILRTTVAAGMTVCMACTLDEDDTLIRQRNKDIMNV 530
            + +   GSAGQSF  FL P + + L G+ NDY  KG++ G     P   + F PEE  I+ N CLY AT G   +   A  RFA  NS A ++VEG GD  CEYMTGG V  LG      AAGM+  +A   D       + N +++++
Sbjct: 1356 IRVNVFGSAGQSFGAFLAPGVTLQLEGDCNDYVGKGLSGGRLIIYPPRVSPFKPEENMIIGNVCLYGATSGHAFISGVAAERFAVRNSGAIAVVEGVGDHGCEYMTGGRVVILGSTGRNFAAGMSGGIAYVYDMQMDFAGKINTEMVDI 1504          
BLAST of EY665587 vs. ExPASy Swiss-Prot
Match: GLSN_MEDSA (Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.298e-22
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   84 LNITFIGSAGQSFARFLTPEMNIHLIGEANDYAAKGMTAGEAG*TPVDTTGFWPEETTIVRNTCLYEATGGLILVKRKAGYRFAEENSLATSLVEGTGDR*CEYMTGGCVDELGILRTTVAAGMTVCMACTLDEDDTLIRQRNKDIMNV 530
            ++I F GSAGQSF  FL P + + L G++NDY  KG++ G+    P   + F P++  ++ N  LY AT G       A  RF   NS A ++VEG GD  CEYMTGG V  LG      AAGM+  +A  LD D T   + N +++++
Sbjct: 1413 IHIQFTGSAGQSFGAFLCPGITLELEGDSNDYIGKGLSGGKVVVYPPKGSNFDPKDNILIGNVALYGATRGEAYFNGMAAERFCVRNSGALAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGTFQSRCNLELVDL 1561          
BLAST of EY665587 vs. ExPASy Swiss-Prot
Match: GLTB_AZOBR (Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense GN=gltB PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 59/139 (42.45%), Postives = 77/139 (55.40%), Query Frame = 3
Query:   81 HLNITFIGSAGQSFARFLTPEMNIHLIGEANDYAAKGMTAGEAG*TPVDTTGFWPEETTIVRNTCLYEATGGLILVKRKAGYRFAEENSLATSLVEGTGDR*CEYMTGGCVDELGILRTTVAAGMTVCMACTLDEDDTL 497
            H+ I   G+AGQS   F    + + ++G+ANDY  KG++ G     P  ++     + TI+ NT LY AT G +    +AG RFA  NS AT +VEG G   CEYMTGG    LG +    AAGMT  MA   D DD+L
Sbjct: 1299 HITIRLRGTAGQSLGAFAVQGIKLEVMGDANDYVGKGLSGGTIVVRPTTSSPLETNKNTIIGNTVLYGATAGKLFAAGQAGERFAVRNSGATVVVEGCGSNGCEYMTGGTAVILGRVGDNFAAGMTGGMAYVYDLDDSL 1437          
BLAST of EY665587 vs. ExPASy Swiss-Prot
Match: GLTB_SYNY3 (Ferredoxin-dependent glutamate synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gltB PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20
Identity = 56/134 (41.79%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   84 LNITFIGSAGQSFARFLTPEMNIHLIGEANDYAAKGMTAGEAG*TPVDTTGFWPEETTIVRNTCLYEATGGLILVKRKAGYRFAEENSLATSLVEGTGDR*CEYMTGGCVDELGILRTTVAAGMTVCMACTLDE 485
            +++ F GSAGQSF  F+   M + L G+ANDY  KG++ G+    P   + F   E  I  N CLY AT G + +    G RF   NS   ++VE  GD  CEYMTGG V  LG      AAGM+  +A   DE
Sbjct: 1314 VHLHFQGSAGQSFGAFIPKGMTLELEGDANDYLGKGLSGGKIIVYPPKGSSFIASENIIAGNVCLYGATAGEVYISGMVGERFCVRNSGVNTVVEAVGDHGCEYMTGGKVVVLGQTGRNFAAGMSGGVAYIFDE 1447          
BLAST of EY665587 vs. ExPASy Swiss-Prot
Match: GLTA_BACSU (Glutamate synthase [NADPH] large chain OS=Bacillus subtilis GN=gltA PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.754e-19
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 3
Query:   84 LNITFIGSAGQSFARFLTPEMNIHLIGEANDYAAKGMTAGEAG*TPVDTTGFWPEETTIVRNTCLYEATGGLILVKRKAGYRFAEENSLATSLVEGTGDR*CEYMTGGCVDELGILRTTVAAGMTVCMACTLDED 488
            + + F GSAGQSF  F+   M ++L G++NDY  KG++ G+      +      ++  I+ N   Y AT G   +  +AG RFA  NS    +VEG GD  CEYMTGG V  LG +    AAGM+  +A  L ED
Sbjct: 1275 IKLHFTGSAGQSFGAFVPKGMTLYLDGDSNDYVGKGLSGGKIIVKSSEGFNSASDDNVIIGNVAFYGATSGEAYINGRAGERFAVRNSGVNVVVEGIGDHGCEYMTGGSVVVLGDVGKNFAAGMSGGIAYVLTED 1409          
BLAST of EY665587 vs. ExPASy Swiss-Prot
Match: GLT1_YEAST (Glutamate synthase [NADH] OS=Saccharomyces cerevisiae GN=GLT1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.537e-15
Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 3
Query:  102 GSAGQSFARFLTPEMNIHLIGEANDYAAKGMTAGEAG*TPVDTTGFWPEETTIVRNTCLYEATGGLILVKRKAGYRFAEENSLATSLVEG-TGDR*CEYMTGGCVDELGILRTTVA-AGMTVCMA-CTLDEDDTLIRQRNKDIMNV 530
            GSAGQSF  FL   +   L G+ANDY  KG++ G     P   + F  +E  IV NTC Y AT G   +   AG RF   NS AT +VE   G+   EYMTGG    L  + +  A +G T  +A C   + D  + + NKD + +
Sbjct: 1355 GSAGQSFGAFLASGITFILNGDANDYVGKGLSGGIIVIKPPKDSKFKSDENVIVGNTCFYGATSGTAFISGSAGERFGVRNSGATIVVERIKGNNAFEYMTGGRAIVLSQMESLNAFSGATGGIAYCLTSDYDDFVGKINKDTVEL 1500          
The following BLAST results are available for this feature:
BLAST of EY665587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GLT1_SCHPO9.939e-2340.27Putative glutamate synthase [NADPH] OS=Schizosacch... [more]
GLSN_MEDSA1.298e-2240.27Glutamate synthase [NADH], amyloplastic OS=Medicag... [more]
GLTB_AZOBR2.892e-2242.45Glutamate synthase [NADPH] large chain OS=Azospiri... [more]
GLTB_SYNY32.707e-2041.79Ferredoxin-dependent glutamate synthase 1 OS=Synec... [more]
GLTA_BACSU1.754e-1940.00Glutamate synthase [NADPH] large chain OS=Bacillus... [more]
GLT1_YEAST1.537e-1539.04Glutamate synthase [NADH] OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665587 ID=EY665587; Name=EY665587; organism=Citrus sinensis; type=EST; length=844bp
CATCAATGAGGACCGATCTGTTTGTGGGCGTATATCGTGTGTGATCGCGA
ACAAAGATGGAGACACTGGCTTTGCTGGCGCACCTAAACATAACATTTAT
TGGGAGTGCTGGGCAGTCATTTGCGCGCTTTTTGACACCTGAGATGAACA
TTCACCTGATTGGAGAGGCCAATGATTATGCGGCAAAGGGAATGACTGCA
GGCGAGGCTGGATAGACTCCTGTGGATACCACTGGATTTTGGCCTGAGGA
AACAACGATAGTGAGGAATACATGCTTGTATGAAGCAACTGGTGGTCTCA
TCTTAGTTAAACGAAAAGCCGGATACAGGTTTGCCGAGGAAAACTCACTT
GCTACATCACTTGTTGAAGGCACTGGAGATCGCTGATGCGAATACATGAC
TGGAGGCTGTGTCGATGAACTTGGAATACTGAGAACAACTGTTGCTGCTG
GAATGACTGTATGTATGGCATGCACTCTCGATGAAGATGATACTCTCATC
CGCCAGCGTAATAAGGATATAATGAACGTCATAGGGCGATCGCTCCCGTT
GACATATGCATAAGAAAGGCTGACTGAACGCCATGTTTAAAAATTGGCAT
CTATATTGGATCTGCTATAATCAAGGAATGGAATGGGATCTACCGTTCTT
TGGCCGCTGGATACAACTAACGAGAAAACCCCCCAAAAGTTTGCGTTAAA
AAAGTCATAAAGGAAATTGGGGAAGTTGATTTTAATTAAGCTTAAGAATC
TAATTTTAATTTTAACAAAAAGACCCAAAAACGGGGGGCCCGCCCCAAAA
AAATTCCCATTTCCCCCTTGCCACCTTTCAAACAAAAAAATTTT
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