EL492437

Overview
NameEL492437
Unique NameEL492437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 3.467e-59
Identity = 109/139 (78.42%), Postives = 119/139 (85.61%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            Y  D CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+P I NRIKECRSYPLYR VR ELG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGAPLPIC
Sbjct:  574 YADDACSANYPLMQKLRQVLVDHALQNGENEKNANSSIFQKILAFEDELKAVLPKEVESARAALESGNPAIANRIKECRSYPLYRFVRGELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPIC 712          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.467e-59
Identity = 108/138 (78.26%), Postives = 123/138 (89.13%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 424
            YI DPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+AR   ENG+ TI N+IKECRSYPLY+ VREELG++ LTGEKV SPGEE DK+FTA+CQGKIIDP+LECL +WNGAPLPI
Sbjct:  586 YIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESARGAYENGNTTISNKIKECRSYPLYKFVREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGAPLPI 723          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.528e-59
Identity = 104/139 (74.82%), Postives = 123/139 (88.49%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            YI DPCSATYPLMQKLRQ LVEHAL NG+NE+  ++SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+ VR+ELG+ +LTGEKVTSPGEEF+KVF AM +G+IIDP+LECL  WNGAPLPIC
Sbjct:  578 YIDDPCSATYPLMQKLRQTLVEHALKNGDNERNLSTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGAPLPIC 716          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 5.913e-59
Identity = 105/139 (75.54%), Postives = 121/139 (87.05%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            Y  DPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+AR  +E+G+P+IPNRI ECRSYPLYRLVR+ELG+  LTGEKV SPGEE +KVFTAMC G+I DP+LECL+ WNGAPLPIC
Sbjct:  582 YADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNINSSIFQKIGAFEDELNAVLPKEVESARALLESGNPSIPNRITECRSYPLYRLVRQELGTELLTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGAPLPIC 720          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 7.723e-59
Identity = 107/139 (76.98%), Postives = 122/139 (87.77%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            YI DPCSATYPL QKLRQVLV+HAL NGE+EK +N+SIFQKIA FEEELKT+LPKEVE+AR   ENG+ TI N+I  CRSYPLY+ VREELG++ LTGE+V SPGEE DK+FTAMCQGKIIDP+L+CL EWNGAPLPIC
Sbjct:  587 YIDDPCSATYPLAQKLRQVLVDHALVNGESEKNSNTSIFQKIATFEEELKTLLPKEVESARTAYENGNSTIANKINGCRSYPLYKFVREELGTSLLTGERVISPGEECDKLFTAMCQGKIIDPLLKCLGEWNGAPLPIC 725          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.009e-58
Identity = 105/139 (75.54%), Postives = 119/139 (85.61%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            YI DPCSATYPLMQKLR+VL+EHAL NGE+EK A++SIFQKI AFEEELK +LPKEVE+AR  +E G+  +PNRI ECRSYPLY+ VREELG  +LTGEKV SPGEE DKVF A+CQGKIIDP+L CL  WNGAPLPIC
Sbjct:   97 YIDDPCSATYPLMQKLREVLIEHALTNGESEKNASTSIFQKIGAFEEELKALLPKEVESARSAIEGGNAAVPNRIAECRSYPLYKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGAPLPIC 235          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.317e-58
Identity = 106/139 (76.26%), Postives = 120/139 (86.33%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            Y+ DPCSATYPLMQKLRQVLVEHAL NGENEK A++SIFQKI AFE ELK VLPKEVE+AR  +E+G P I NRI ECRSYPLY+ +REELG+NFLTGEKV SPGEE D+VFTAM +G I+DP+L+CL  WNGAPLPIC
Sbjct:  575 YVDDPCSATYPLMQKLRQVLVEHALKNGENEKNASTSIFQKIEAFEAELKAVLPKEVESARVALEDGKPAIANRITECRSYPLYKFIREELGTNFLTGEKVMSPGEECDRVFTAMSKGLIVDPLLKCLEGWNGAPLPIC 713          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.317e-58
Identity = 108/138 (78.26%), Postives = 118/138 (85.51%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 424
            YI DPCSATYPLMQKLRQVLV+HAL N E EK  NSSIFQKIA FEEELK +LPKEVE AR   E+G   IPN+I+ECRSYPLY+ VREELG+  LTGEKV SPGEEFDK+FTAMCQGKIIDP++ECL EWNGAPLPI
Sbjct:  575 YIDDPCSATYPLMQKLRQVLVDHALVNAECEKDVNSSIFQKIAIFEEELKNLLPKEVEGARAAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGAPLPI 712          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.935e-58
Identity = 104/139 (74.82%), Postives = 116/139 (83.45%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 427
            Y  DPC  TYPLMQKLR+ LV HAL+NGENEK  N+SIF KIA FEEELK +LPKEVENAR +VENG P I NRI+ECRSYPLY+ VREELG+  LTGEKV SPGEE DKVFTAMC+GK++DP+L CL  WNGAPLPIC
Sbjct:  572 YADDPCLTTYPLMQKLRETLVGHALDNGENEKDVNTSIFHKIAIFEEELKAILPKEVENARASVENGIPAISNRIEECRSYPLYKFVREELGTELLTGEKVRSPGEELDKVFTAMCEGKLVDPLLACLEAWNGAPLPIC 710          
BLAST of EL492437 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 3.833e-58
Identity = 105/138 (76.09%), Postives = 119/138 (86.23%), Query Frame = 2
Query:   11 YIVDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPI 424
            YI DPC ATYPLMQKLR  LVEHAL NGE E++AN+SIF KIAAFEEELKT+LPKEV+NAR  +ENG   IPNRIKECRSYPLYR VREELG++ LTGEK+ SPGEE  KVF A+C GK++DP+LECL+EWNGAPLPI
Sbjct:  572 YIDDPCLATYPLMQKLRAELVEHALKNGERERSANTSIFHKIAAFEEELKTILPKEVDNARIEIENGKSEIPNRIKECRSYPLYRFVREELGTSLLTGEKIKSPGEECYKVFNAICAGKLVDPLLECLKEWNGAPLPI 709          
The following BLAST results are available for this feature:
BLAST of EL492437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PAL2_TOBAC3.467e-5978.42Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_PEA3.467e-5978.26Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PETCR4.528e-5974.82Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL1_SOLTU5.913e-5975.54Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PALY_TRISU7.723e-5976.98Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_MALDO1.009e-5875.54Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PALY_DIGLA1.317e-5876.26Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL1_SOYBN1.317e-5878.26Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL1_LITER2.935e-5874.82Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL1_RUBID3.833e-5876.09Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]

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Properties
Property NameValue
Genbank descriptionC0350 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC0350, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492437 ID=EL492437; Name=EL492437; organism=Citrus sinensis; type=EST; length=428bp
ACGTCTTTGCTACATTGTTGACCCCTGCAGTGCTACCTATCCATTGATGC
AAAAGCTAAGGCAAGTACTTGTTGAGCACGCACTGAACAATGGAGAGAAC
GAGAAGACTGCCAACTCTTCAATCTTCCAGAAGATTGCAGCCTTTGAGGA
GGAATTGAAAACCGTTTTGCCCAAAGAAGTTGAGAACGCCAGGCAGACTG
TTGAGAATGGAAGTCCAACAATTCCCAACAGGATCAAAGAATGCAGGTCT
TACCCTTTGTACAGGTTAGTGAGGGAGGAGCTCGGGTCTAATTTTCTAAC
AGGGGAAAAAGTTACATCGCCCGGCGAGGAATTTGACAAAGTGTTTACAG
CAATGTGCCAGGGCAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAA
TGGAATGGCGCCCCTCTTCCAATTTGTT
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