EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPF (Tryptophan synthase beta chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF AVIGKETR Q + G PD L+AC+GGGSNAMGLFH F+ S Sbjct: 202 TVAGPHPYPAMVRDFQAVIGKETRDQLQAQEGRLPDSLVACIGGGSNAMGLFHPFLDDKS 261
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METS4 (Tryptophan synthase beta chain OS=Methylobacterium sp. (strain 4-46) GN=trpB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP MVRDF +VIG+ETR Q L + G PD L+AC+GGGSNAMGLFH F+ Sbjct: 202 TVAGPHPYPAMVRDFQSVIGRETREQMLAQEGRLPDSLVACIGGGSNAMGLFHPFL 257
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_BRASB (Tryptophan synthase beta chain OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYPMMVRDF +VIG ETR Q E G PD L+AC+GGGSNAMGLFH F+ S Sbjct: 201 TVAGPHPYPMMVRDFQSVIGDETRVQMQEAEGRLPDSLVACIGGGSNAMGLFHPFLDDPS 260
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METJA (Tryptophan synthase beta chain OS=Methanocaldococcus jannaschii GN=trpB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQD 190 S GPHPYPMMVR+F VIGKE + Q LEK G PDV++ACVGGGSNA+G F+EF+ D Sbjct: 201 SALGPHPYPMMVREFQRVIGKELKEQILEKEGRLPDVIVACVGGGSNAIGAFYEFLDDD 259
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CHLTE (Tryptophan synthase beta chain OS=Chlorobium tepidum GN=trpB-1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV G HPYPMMVRDF +VIG+ETR+Q L++ G PDV++ACVGGGSNA+G+F+EF+ Sbjct: 198 SVIGMHPYPMMVRDFQSVIGRETRQQVLDQAGRLPDVIVACVGGGSNAIGMFYEFL 253
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_ACIF5 (Tryptophan synthase beta chain OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=trpB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP+MVRDFH VIG E R Q LE G PD LIACVGGGSNA+GLF+ F+ Sbjct: 195 TVAGPHPYPVMVRDFHRVIGDEARAQCLELTGRLPDCLIACVGGGSNAIGLFYPFI 250
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_ACIF2 (Tryptophan synthase beta chain OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP+MVRDFH VIG E R Q LE G PD LIACVGGGSNA+GLF+ F+ Sbjct: 195 TVAGPHPYPVMVRDFHRVIGDEARAQCLELTGRLPDCLIACVGGGSNAIGLFYPFI 250
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRAB (Tryptophan synthase beta chain 1 OS=Pyrococcus abyssi GN=trpB1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SV GPHPYP++VRDF +VIG+E R Q LE G PDV++ACVGGGSNAMG+F+ FV S Sbjct: 185 SVVGPHPYPIIVRDFQSVIGREAREQILEAEGDLPDVIVACVGGGSNAMGIFYPFVKDKS 244
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METC4 (Tryptophan synthase beta chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=trpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.178e-17 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP MVRDF +VIG ET++Q LE G PD LIAC+GGGSNAMGLFH F+ Sbjct: 209 TVAGPHPYPAMVRDFQSVIGIETKQQMLEMEGRLPDSLIACIGGGSNAMGLFHPFL 264
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPL (Tryptophan synthase beta chain OS=Legionella pneumophila (strain Lens) GN=trpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.178e-17 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF A+IG E R Q +EK G PD L+ACVGGGSNA+GLF+ F+ S Sbjct: 195 TVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIGLFYPFLNDQS 254 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |