CX674457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_NEOFI (ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.582e-14 Identity = 64/245 (26.12%), Postives = 98/245 (40.00%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA Q+ F ++ + + + VG + + L K+P I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++ + TFL SAT++ L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +V T R+ LL G Sbjct: 131 ELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERR-------TFL-------------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLG 316
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_ASPFU (ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.066e-14 Identity = 64/245 (26.12%), Postives = 98/245 (40.00%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA Q+ F ++ + + + VG + + L K+P I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++ + TFL SAT++ L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +V T R+ LL G Sbjct: 131 ELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERR-------TFL-------------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLG 316
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14 Identity = 62/245 (25.31%), Postives = 98/245 (40.00%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA Q+ F + + + + VG + + L K+P I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++ + T+L SAT++ L + L +PL + ++++ L+ + K K LYLV LL + CI+F +V T RL L G Sbjct: 131 ELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVLPRERR-------TYL-------------------------------FSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLG 316
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: HAS1_CRYNE (ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans GN=HAS1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.602e-14 Identity = 67/268 (25.00%), Postives = 115/268 (42.91%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKT 798 +LALQ+ V + + G+ +G ++ E +L+K V+++VATPGRL+DH+ T+GF ++L LV+DE DR+L ++ + +++L S+N M+ SAT T LA++ L PL++ ET+ + LE ++CES + + L L+ ++K IVF SS S LLN+ + + + + G Q+ R+ T Sbjct: 212 ELALQIFGVAKELMQGHSQTFGVLMGGANRKAEADKLVK---------------------GVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSENRQ-------------------------------------SMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCESDQRFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKRTNT 418
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DBP6_PICST (ATP-dependent RNA helicase DBP6 OS=Pichia stipitis GN=DBP6 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.602e-14 Identity = 68/254 (26.77%), Postives = 108/254 (42.52%), Query Frame = 1 Query: 13 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGEL 741 QVK F ++ LSV SI +E +++ P DI+V+TPGRL++HI+ + L L +LV+DE DRLL +++Q W ++ D + +K P K++ SATLT D KL+ L P + + + + +P L Y + ++ +KPL L LL++ ++FT S E++ RLC LL FG+L Sbjct: 248 QVKATFVQLSRGTNLSVVSLRNDVSIKEEGIKIVNSPP--------------------DIIVSTPGRLVEHIS-NKSINLNSLQFLVIDEADRLLNQSFQNWCQVLISSLEGD------------------------VNIAEEWKITPQ----KLIFSATLTTDSGKLSALKFQKPRLVIVNDRKQLVNEIFNVPSSLSEYTIQFGTAKASIKPLILAKYLLENNKLSNVLIFTKSNEASIRLCKLLELMFGKL 452
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_KLULA (ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis GN=RRP3 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.850e-14 Identity = 60/242 (24.79%), Postives = 100/242 (41.32%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 726 +LA Q+K+ F ++ +G+ VG S+ D+ +L+++P I++ATPGRLMDH+ T+GF L L YLV+DE DRLL + L +L + + + + SAT+T +KL + L +P+ +Y+ + L ++ LK +L+ LL + IVFT + + R+ L N Sbjct: 146 ELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFNLRKLKYLVMDEADRLLDMEFGPVLDRILNIIPTQGRTTY-------------------------------------LFSATMTSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKSTIVFTRTKANAERISNLCN 328
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_NEUCR (ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa GN=rrp-3 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.749e-13 Identity = 64/245 (26.12%), Postives = 96/245 (39.18%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA Q+ F A+ + L L +G + + L K+P ++VATPGRL+DH+ T+GF+L + YLV+DE DRLL + L +L+ FLP RR + SAT++ L + L PL ++ +Y L+S + K YLV L + I+FT +V T R+ LL G Sbjct: 169 ELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPH---------------------VIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILK---------------FLPRE-------RR----------------TFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLG 354
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_LODEL (ATP-dependent rRNA helicase RRP3 OS=Lodderomyces elongisporus GN=RRP3 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.679e-13 Identity = 55/245 (22.45%), Postives = 109/245 (44.49%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA Q+K+ F A+ ++GL +G S+ ++ +L+++P +++ATPGRL+DH+ T+GF+L+ L YLV+DE DR++ Y + +L K P + + + +AT++++ K + L+ P+ + + K+P++L+ + K L+ ++ ++ I+FT +V T R C +L + G Sbjct: 177 ELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPH---------------------VIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQIL-------------------------------------KQIPSHQRITYLYTATMSREIEKFKR-SLNSPVQVEIVKLE-KVPDKLKQTMCLTSPNTKDTRLIQIVNLDSMKRVIIFTRTVVHTRRCCLMLLNLG 361
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_MAGGR (ATP-dependent rRNA helicase RRP3 OS=Magnaporthe grisea GN=RRP3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.133e-12 Identity = 64/241 (26.56%), Postives = 97/241 (40.25%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 723 +LA Q+ F A+ ++ L + VG + + + L K+P I+VATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +L+ FLP RR + SAT++ L + L PL ++ ++ K L L K K +YL+ L + IVFT +V R+ LL Sbjct: 189 ELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTALGKKPH---------------------IVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR----------------TFLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILL 370
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DRS1_VANPO (ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.133e-12 Identity = 68/261 (26.05%), Postives = 108/261 (41.38%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKP---LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 768 +LA+Q+ DV I V GL+ GLAVG ++ + EL RP DI++ATPGR +DH+ + F ++ + LV+DE DR+L E +Q L +L T LPS + ++ SAT+ L L L P+ + + + + ++ LKP YL+ L G+++ +VF + E H+L +L G L +K+ E G Sbjct: 313 ELAIQIADVGKKIGKYVSGLTFGLAVGGLNLRQQEQELKTRP---------------------DIVIATPGRFIDHVRNSSSFNVDSVEVLVMDEADRMLEEGFQEELNEIL---------------TLLPS-----------------------KRQTLLFSATMNSRIKSLISLSLRKPVRIMINPPKQAAARLTQEFVRIRKRDHLKPALLFYLIRKLDGTGQKRIVVFVARKEMAHKLRIIL---GLLGMKVGELHG 511 The following BLAST results are available for this feature:
BLAST of CX674457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674457 ID=CX674457; Name=CX674457; organism=Citrus sinensis; type=EST; length=803bpback to top |