CX674457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RRP3_CHAGB (ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum GN=RRP3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.480e-12 Identity = 63/245 (25.71%), Postives = 97/245 (39.59%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA Q+ F A+ + L L +G + + L K+P ++VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L+ FLP RR + SAT++ L + L PL ++ ++Y+ L + K YL+ L + I+FT +V T R+ LL G Sbjct: 144 ELAAQIAQSFEALGSLISLRCALILGGLDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRLLDMDFGPILDKILK---------------FLPRE-------RR----------------TFLFSATMSSKVESLQRACLRDPLKVSISSSKYQTVSTLVQNYVFIPHTHKDTYLIYLCNEFAGQTIIIFTRTVIETQRIAILLRTLG 329
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: HAS1_DEBHA (ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii GN=HAS1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 59/217 (27.19%), Postives = 100/217 (46.08%), Query Frame = 1 Query: 166 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRXSVRSKT 798 ++L V++L+ATPGRL+DH+ T+GF +++ LV+DE DR+L ++ + ++++ NE+R S M+ SAT T LA++ L PL++ E+ LE ++CES + L L + L+ ++K IVF SS C + +FGEL + + + G Q+ R+ T Sbjct: 221 EKLMKGVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKIL--PNEDRQS-----------------------------------MLFSATQTTKVEDLARISLRPGPLYINVASESEASTVAGLEQGYVVCESDKRFLLLFSFLKRNVKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKRTNT 393
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: HAS1_PHANO (ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum GN=HAS1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.307e-12 Identity = 55/210 (26.19%), Postives = 96/210 (45.71%), Query Frame = 1 Query: 166 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG----ELRIKIKEYSGLQR 777 ++L V++L+ATPGRL+DH++ T+GF ++L L++DE DR+L ++ + +++++ +D + M+ SAT T LA++ L PL++ + E LE +IC+S + L + L+ ++K IVF SS S LLN+ EL K+K+ + R Sbjct: 248 EKLAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSIIKILPTDRQT--------------------------------------MLFSATQTTKVEDLARISLKAGPLYINVDYRKEHSTVEGLEQGYVICDSDTRFRLLFSFLKKHQKKKVIVFFSSCNSVKFYAELLNYIDLPVLELHGKLKQQARTNR 419
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: HAS1_MAGGR (ATP-dependent RNA helicase HAS1 OS=Magnaporthe grisea GN=HAS1 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.307e-12 Identity = 56/213 (26.29%), Postives = 98/213 (46.01%), Query Frame = 1 Query: 166 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKT 798 ++L V++L+ATPGRL+DH+ T F ++L LV+DE DR+L ++ + ++++ + ++ M+ SAT T LA++ L PL+L E + Y E LE ++CE+ + + L + LQ + ++K IVF SS S LLN+ + ++ + G Q+ R+ T Sbjct: 229 EKLSKGVNLLIATPGRLLDHLQNT-PFVFKNLRSLVIDEADRILEIGFEDEMRQIIKILPKERQS--------------------------------------MLFSATQTTKVEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFILLFSFLQKMKKKKIIVFFSSCNSVKYYAELLNY---IDCQVLDLHGKQKQQKRTNT 399
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DBP6_YARLI (ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica GN=DBP6 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11 Identity = 64/241 (26.56%), Postives = 104/241 (43.15%), Query Frame = 1 Query: 4 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 723 L +QV+DV ++ LSV ++ ++ S +R LE DI+VA PGRL++ + ++ +LVVDE DRLL + Y W +VLQ +N+ R T L + + ++ SATLT +P +A +D+H+P +F+ Y +P+ L + KPL L LL + +VFT S E+ R+ ++ Sbjct: 278 LVMQVRDVLENLSKGSSLSV------VALRNDRSTKRERAVLETA----------------DIVVAAPGRLVEQVKENPEL-FSYIEFLVVDEADRLLGQDYYDWA-SVLQ----NNQQRAQAGKTNLTEHY-------------------VRNMQTLIFSATLTANPEHIASMDIHNPGVFVIGSSDSYSIPKSLTEIVTHVSAAEKPLMLCELLVQRDINRGVVFTKSSETAARVARMM 471
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: HAS1_YARLI (ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica GN=HAS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11 Identity = 54/213 (25.35%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 166 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETRY-KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKT 798 ++L V++LV TPGRL+DH+ ++GF ++L L++DE DR+L ++ + ++++ + ++ M+ SAT T LA++ L PL+L E E LE ++C+S + L L + L+ +K IVF SS S LLN+ + + + + G Q+ R+ T Sbjct: 248 EKLNKGVNLLVCTPGRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKERQS--------------------------------------MLFSATQTTKVEDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVVCDSDKRFLLLFSFLKRNAGKKIIVFLSSCNSVKFYGELLNY---IDLPVLDLHGKQKQQKRTNT 419
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DRS1_ASHGO (ATP-dependent RNA helicase DRS1 OS=Ashbya gossypii GN=DRS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11 Identity = 63/250 (25.20%), Postives = 104/250 (41.60%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA+QV DV + V GL+ GLAVG ++ + L RP DI++ATPGR++DHI + F+++ + LV+DE DR+L + +Q L ++ L S + ++ SAT+ +L L L P+ + + + + + +L LKP L LL+ L G+++ +VF + E HRL +L G Sbjct: 301 ELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRP---------------------DIVIATPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDGFQDELNEIMSLIPSKRQT--------------------------------------LLFSATMNSRIKQLISLSLKKPVRIMIDPPKQAANKLTQEFVRLRKREHLKPALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLG 491
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: HAS1_LODEL (ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus GN=HAS1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.138e-11 Identity = 70/263 (26.62%), Postives = 115/263 (43.73%), Query Frame = 1 Query: 37 IAPAVGLSVGLAVGQSSIADEI----SELIKRPKLEAGICYDPEDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKT 798 I P G +V + +A +I +L++ GI D QE L V++LVATPGRL+DH+ T+GF +L LV+DE DR+L ++ + ++++ NE+R + M+ SAT T LA++ L PL++ E + LE ++C+S + L L + L+ ++K IVF SS S LLN+ + + + + G Q+ R+ T Sbjct: 160 IKPRNGTAVIIITPTRELALQIFGVARQLMEYHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQGFVFLNLKALVIDEADRILEIGFEEEMKQIIKIL--PNEDRQT-----------------------------------MLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNIKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKRTNT 382
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DRS1_KLULA (ATP-dependent RNA helicase DRS1 OS=Kluyveromyces lactis GN=DRS1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11 Identity = 60/250 (24.00%), Postives = 103/250 (41.20%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 735 +LA+QV DV I V GL+ GLAVG ++ + L RP DI++ATPGR +DH+ + F+++ + LV+DE DR+L E +Q L ++ L S + ++ SAT+ +L L L P+ + + + + + ++ LKP L L++ L +++ +VF + E+ H+L +L G Sbjct: 315 ELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQQEQALKTRP---------------------DIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEELQEIMSLIPSKRQT--------------------------------------LLFSATMNSKIKQLISLSLKKPVRIMIDPPKQAADKLTQEFIRIRKRDHLKPALLYQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLLG 505 The following BLAST results are available for this feature:
BLAST of CX674457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674457 ID=CX674457; Name=CX674457; organism=Citrus sinensis; type=EST; length=803bpback to top |