EY665532

Overview
NameEY665532
Unique NameEY665532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_HALHL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gatA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 65/190 (34.21%), Postives = 96/190 (50.53%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            + + T+ ++  A    +++S +L +  L  I + +P LN +I V  + A + AD AD   R    G L G   +P++ KD   T D + TT GS  L     P DA VV +L EAGA++LGKA++ E+A   SSN  + F    G  +NP+ L A P              L   A GT+T GSI  P++
Sbjct:    1 MHQKTVAEISAALHAGEISSRELTDSLLKRIEQFDPRLNSLITVTAEQARAAADAADARLRAGEAGPLTG---VPLVHKDIFCT-DGVATTCGSRMLEPFRAPYDATVVRRLAEAGAVMLGKANMDEFA-MGSSNETSYF----GPVRNPWDLDAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAA 181          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA2_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium acetobutylicum GN=gatA2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.732e-16
Identity = 61/190 (32.11%), Postives = 92/190 (48.42%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            I + T+  L+ A     L S  +V+ Y   I R  P +N  I +  D AL +A + D  +++     +  L GIPI +KDNI T D + TT  S  L   V P DA V+ KL+   AII+GK ++ E+A   SS   + F       KNP  ++  P              +  ++LG++T GSI  P++
Sbjct:    3 ILDMTVEQLRNAILDKHLKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAKDVD--KKIANGDKVGRLAGIPIAIKDNICT-DGIKTTCASKMLYDFVPPYDATVIKKLKAEDAIIIGKVNMDEFA-MGSSTENSAFKIT----KNPRDITRVPGGSSGGSAAVVAAKMAPISLGSDTGGSIRQPAA 184          

HSP 2 Score: 27.7202 bits (60), Expect = 2.732e-16
Identity = 13/27 (48.15%), Postives = 15/27 (55.56%), Query Frame = 2
Query:  677 VVGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VVG+KPT GL  R G I      D +G
Sbjct:  188 VVGLKPTYGLVSRFGLIAFASSLDQIG 214          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_HAHCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hahella chejuensis (strain KCTC 2396) GN=gatA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.512e-16
Identity = 66/186 (35.48%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  114 TINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            TI+++    +  + +S ++ + YL  I RLNP LN  I V  D ALSQA++AD   R+ A G    L+G+P+  KD   T+  + TT GS  L   V P ++ V  K  +AGA+ LGK ++ E+A   SSN  + F    G  +NP+     P              L A A GT+T GSI  P++
Sbjct:    5 TISEIISGLRDKQFSSREITQDYLARIKRLNPELNCFITVTEDLALSQAEQADA--RLNA-GQTSVLNGVPLAHKDVFCTEG-VTTTCGSRMLEKFVPPYESTVTRKFIDAGAVTLGKTNMDEFA-MGSSNENSYF----GPVRNPWDTERAPGGSSGGSAAAVAAGLCAAATGTDTGGSIRQPAA 181          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_MAGSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Magnetococcus sp. (strain MC-1) GN=gatA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16
Identity = 66/192 (34.38%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSSPT 674
            + E T+ +        +++S +L +  L +I + NP +N  + V+ + AL+ A  AD   R+ A    P L GIPI  KD   T D M TT  S  L   + P DA + T LR+AGA+ILGK +L E+A   SS   + F    G  +NP+     P             N+   A GT+T GSI  P+S T
Sbjct:    3 LNELTLREAADKLATKEISSVELTQACLDQIAKHNPTINAFVTVDAEKALAAAQAADA--RIAAGNGAP-LTGIPIAHKDIFNTTD-MRTTCSSRMLENFIPPFDATITTHLRQAGAVILGKTNLDEFA-MGSSTETSYF----GASRNPWDTQRTPGGSSGGSSAAIAANMAICATGTDTGGSIRQPASLT 185          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_RENSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=gatA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.987e-16
Identity = 65/176 (36.93%), Postives = 90/176 (51.14%), Query Frame = 3
Query:  150 KLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSSPT 674
            ++TS Q+ + YL  I  ++  LN  + +N + AL  A E D +R   A   L  L G+PI +KD I TK +  TTAGS  L G + P DA V+ K+R A   ILGK +L E+A   SS   + F    G  +NP+ L+  P                 +ALGT+T GSI  P + T
Sbjct:   20 EVTSVQVTQAYLDRIALVDGELNAFLHLNAEEALRVAAEVDADRA--AGKELHELAGVPIAIKDLIVTKGQP-TTAGSKILEGWISPYDATVIEKIRAAKMPILGKTNLDEFA-MGSSTEHSAF----GPTRNPWDLTRIPGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVT 187          

HSP 2 Score: 25.7942 bits (55), Expect = 5.987e-16
Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = 2
Query:  680 VGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VG+KPT G   R G I +    D +G
Sbjct:  190 VGVKPTYGGVSRYGAIAMASSLDQIG 215          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_PSEAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa GN=gatA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16
Identity = 68/192 (35.42%), Postives = 96/192 (50.00%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSSPT 674
            + + T+ ++  A    + ++ +L    LG I +L+P LN  I +  D A++QA  AD ERR  A G    L G PI  KD   T+  + T+ GS  L   V P DA VV KL  AGA+ LGK ++ E+A   SSN  + +    G  KNP+ L   P              L+  A GT+T GSI  P++ T
Sbjct:    2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAAD-ERR--ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLNMDEFA-MGSSNQSSHY----GAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALT 184          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_SYNAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus aciditrophicus (strain SB) GN=gatA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.793e-16
Identity = 61/188 (32.45%), Postives = 92/188 (48.94%), Query Frame = 3
Query:  108 EATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEV-NPDALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            + TI++LQ   +Q  +TS  +V    G I  +   ++  I +    AL +A +AD + R    G +  L GIP+ LKD   T+  + TT GS  L   + P DA VV KLREAGA+  GK ++ E+A   S+       +  G  +NP+ L   P             +    ALG++T GSI  P++
Sbjct:    5 QLTIHELQNKIRQGGVTSTAIVNSVFGRIDAVEENVHSYITLMRESALEEAQKADEQIRT---GEINALTGIPVALKDIYCTRG-VRTTCGSLILDNFIPPYDATVVVKLREAGAVFTGKTNMDEFAMGSSTET-----SYYGFTRNPWDLERIPGGSSGGSAAAVAADECIAALGSDTGGSIRQPAA 183          

HSP 2 Score: 25.0238 bits (53), Expect = 7.793e-16
Identity = 12/27 (44.44%), Postives = 14/27 (51.85%), Query Frame = 2
Query:  677 VVGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VVG+KPT G   R G I      D +G
Sbjct:  187 VVGMKPTYGRVSRFGLIAFASSLDQIG 213          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_THETN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter tengcongensis GN=gatA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.013e-15
Identity = 57/186 (30.65%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  114 TINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            T+++L+    + ++++ ++ + YL  I  + P ++ ++ +  + AL +A  AD    +   G    L GIP+++KDNI+T + + TT  S  L   + P +A VV +L   G +ILGK++L E+A   SS   + F       KNP+ LS  P             +  A ALG++T GSI  P+S
Sbjct:    7 TVHELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVAD---EMIKNGEAKDLTGIPVIIKDNIST-EGIRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKSNLDEFA-MGSSTENSAFKTT----KNPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTGGSIRQPAS 183          

HSP 2 Score: 26.9498 bits (58), Expect = 1.013e-15
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 2
Query:  677 VVGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VVG+KPT GL  R G +      D +G
Sbjct:  187 VVGMKPTYGLVSRYGLVAFASSLDQIG 213          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_GEOSF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp. (strain FRC-32) GN=gatA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.013e-15
Identity = 64/188 (34.04%), Postives = 91/188 (48.40%), Query Frame = 3
Query:  108 EATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            E TI++L    K+ +++S +  E  L  I  + P +N  I V  D AL  A EAD  +R+ A G +  L GIP+ LKD   TK  + TT  S  L   + P DA  V +L+  GA+++GK +  E+A   SS   + F    G+  NP+ L   P                   LGT+T GSI  P+S
Sbjct:    5 ELTIHELHDKLKKKEVSSVEATESMLARIEAVEPKVNAFITVTADQALKDAAEAD--KRI-ADGDMDKLTGIPVALKDIFLTKG-VRTTCASRILENFIPPYDATSVARLKARGAVLVGKLNQDEFA-MGSSTESSYF----GKTSNPWNLECIPGGSSGGSAAAIAAQQATATLGTDTGGSIRQPAS 183          

HSP 2 Score: 24.2534 bits (51), Expect = 1.013e-15
Identity = 12/26 (46.15%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  680 VGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VG+KPT G   R G I      D VG
Sbjct:  188 VGLKPTYGRVSRYGVIAYASSLDQVG 213          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_PSEA7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain PA7) GN=gatA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15
Identity = 68/192 (35.42%), Postives = 95/192 (49.48%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSSPT 674
            + + T+ ++  A    + ++ +L    LG I +L+P LN  I V  D A++QA  AD ERR  A G    L G PI  KD   T+  + T+ GS  L   V P DA VV KL  AG + LGK ++ E+A   SSN  + +    G  KNP+ L   P              L+  A GT+T GSI  P++ T
Sbjct:    2 LHQLTLAEIARALADKRFSAEELTRTLLGRIRQLDPQLNSFISVTDDLAIAQAKAAD-ERR--ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLAAAGTVTLGKLNMDEFA-MGSSNQSSHY----GAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALT 184          
The following BLAST results are available for this feature:
BLAST of EY665532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
GATA_HALHL2.689e-1634.21Glutamyl-tRNA(Gln) amidotransferase subunit A OS=H... [more]
GATA2_CLOAB2.732e-1632.11Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS... [more]
GATA_HAHCH3.512e-1635.48Glutamyl-tRNA(Gln) amidotransferase subunit A OS=H... [more]
GATA_MAGSM4.587e-1634.38Glutamyl-tRNA(Gln) amidotransferase subunit A OS=M... [more]
GATA_RENSM5.987e-1636.93Glutamyl-tRNA(Gln) amidotransferase subunit A OS=R... [more]
GATA_PSEAE5.991e-1635.42Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_SYNAS7.793e-1632.45Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_THETN1.013e-1530.65Glutamyl-tRNA(Gln) amidotransferase subunit A OS=T... [more]
GATA_GEOSF1.013e-1534.04Glutamyl-tRNA(Gln) amidotransferase subunit A OS=G... [more]
GATA_PSEA71.022e-1535.42Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665532 ID=EY665532; Name=EY665532; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGAATAATGTGTCATTGACCTTTCCTTACTTTTCACATCTA
CTCCTGATTCTTCTAGCCATGTCAACCGATCGATCCGACGATGAATTCCC
AATAAGAGAGGCAACTATCAACGATCTCCAGCTCGCTTTCAAGCAAAACA
AGCTTACGTCCTGGCAGCTGGTTGAATTTTACCTCGGAGAAATCCACAGG
CTCAACCCGGTGCTCAACGGAGTCATAGAGGTGAACCCTGATGCACTATC
CCAAGCTGATGAAGCTGACTGCGAGCGCAGGGTTAAGGCACCAGGTTCAC
TGCCCGGTTTACATGGGATTCCTATTCTTCTCAAGGATAACATTGCAACG
AAGGACAAGATGAACACCACTGCTGGCTCGTATGCTCTGCTCGGCTCAGT
CGTGCCCCGGGATGCTGGTGTGGTGACCAAATTGAGGGAAGCTGGTGCCA
TTATTCTGGGAAAGGCTAGCTTGAGTGAGTGGGCTAATTTTAGATCCTCA
AATGCACCCAATGGTTTCTGTGCTAGGGGTGGCCAGGGAAAGAATCCATA
TGTTCTATCAGCAGATCCCTGGGGGTCGAGCAGTGGCTCAGCAATATCGG
TAGCAGGCAACTTGGTTGCAGTGGCACTGGGAACTGAAACTGATGGGTCA
ATTCTCTCTCCTTCCAGTCCAACTCAGTAGTGGGAATCAAACCAACGGTT
GGGCTCACCCGCAGAGCCGGCGGCATCCCTTTAACTCCTAGGCAGGACTC
CGTTGGGGAATGGGAACCTTTGCCATATCATTTTGATGGCCGTTACCCTT
TAATTGACAAGGGACTATCTGCCCCGGGAGGCCTTATTTGCAAACTGGGA
GCGGAGGCTGCTTTATGGTGCTGGACGCCACTGGCGGGGATTGGTTCCCG
AGGAGCCCGG
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