EY665532

Overview
NameEY665532
Unique NameEY665532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_DEHSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain BAV1) GN=gatA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14
Identity = 61/186 (32.80%), Postives = 91/186 (48.92%), Query Frame = 3
Query:  114 TINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            TI       K +K++S +L + +L  I +L P +   + V P+ ALSQA+ AD   +    G +  L GIP+ LKD + TK  + TT  S  L   V P +A VV KL + GA++LGK ++ E+A   S+     F  R     NP+     P             +    +LG++T GSI  P+S
Sbjct:    8 TIAQSHKLLKDHKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD---KAIKQGDIRPLTGIPMALKDVLCTKG-IRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTR-----NPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPAS 184          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_BURPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gatA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14
Identity = 65/190 (34.21%), Postives = 92/190 (48.42%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            + E ++ +L+ A    + ++ +L + YL  I   N  LN  I+V+PD  L+QA  AD        G L GL   PI  KD   TK    +TAGS  L     P DA VV +L+ AG + +GK ++ E+A   SSN  + F    G  +NP+ + A P              L   A GT+T GSI  P+S
Sbjct:    1 MHEKSLTELRAALTAKECSAVELAQLYLKRIDAANS-LNAFIQVDPDLTLAQAKAADALLHTGHAGPLVGL---PIAHKDVFVTKG-WRSTAGSKMLSNYESPFDATVVARLQNAGMVCVGKTNMDEFA-MGSSNENSYF----GPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAS 180          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_COREF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium efficiens GN=gatA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.680e-14
Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 3
Query:  114 TINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPDA-LSQADEADCERRV-KAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSSPT 674
            T  +L       ++TS ++ + +L  I+ ++  ++  + V  +A L+ AD  D      +AP S   L G+P+ LKD + T D   TTA S  L G + P DA V  KLREAG  ILGK ++ E+A   SS   + +    G  +NP+ L   P                 +A+GT+T GSI  P++ T
Sbjct:   18 TAAELAGLIHSREVTSREVTQAHLDRINEVDGEIHAFLHVGEEAALAAADAVDKALDAGEAPAS--ALAGVPLALKDALVTTDAP-TTAASKILEGYMSPYDATVTRKLREAGIPILGKTNMDEFA-MGSSTENSAY----GATRNPWDLERTPGGSGGGSSAALASGEAPLAIGTDTGGSIRQPAALT 198          

HSP 2 Score: 25.0238 bits (53), Expect = 6.680e-14
Identity = 12/28 (42.86%), Postives = 14/28 (50.00%), Query Frame = 2
Query:  674 SVVGIKPTVGLTRRAGGIPLTPRQDSVG 757
            + VG+KPT G   R G I      D VG
Sbjct:  199 NTVGVKPTYGTVSRYGLIACASSLDQVG 226          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_DESAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.685e-14
Identity = 59/188 (31.38%), Postives = 92/188 (48.94%), Query Frame = 3
Query:  108 EATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEV-NPDALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            E ++ ++       ++T+ + V+  L +I +  P    ++ + N +AL QA+E D       P +   L G+P+++KD +AT   + TTAGS  L G     D+  V KL+EAGAII+GKA++ E+A    S   N   +      NP+  S  P                  ALGT+T GSI  P+S
Sbjct:    6 EKSLTEIHAMLMTKEVTATEAVKACLEQIAKSEPETKALLHICNDEALKQAEEMDAA----GPDASKPLWGVPVVIKDALATNG-IPTTAGSKILEGFTPFYDSTAVAKLKEAGAIIVGKANMDEFA--MGSTTEN---SAYQTTTNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLPAS 183          

HSP 2 Score: 23.483 bits (49), Expect = 6.685e-14
Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  680 VGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VG+KPT G   R G I      D +G
Sbjct:  188 VGVKPTYGRVSRYGMIAYGSSLDQIG 213          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_EXIS2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gatA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.687e-14
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 3
Query:  108 EATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPDALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            E  + +L    K  ++   +LV+     I R++  +   + +N DA  QA   D   + +A      L G+PI +KDNI TK  M TT GS  L   V   DA VV +L EAGAI +GK ++ E+A   SSN  + +       +NP+     P               V  +LG++T GSI  P++
Sbjct:    5 EHGVKNLHTLVKDGEVKVSELVQESFDRIDRVDGKIGAFLSLNEDAFEQAKRMDEIAKHEANP----LFGLPIGVKDNIVTKG-MTTTCGSKFLENFVPAHDATVVERLHEAGAITIGKLNMDEFA-MGSSNENSAY----KPVRNPWNTKHVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAA 181          

HSP 2 Score: 27.335 bits (59), Expect = 6.687e-14
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 2
Query:  677 VVGIKPTVGLTRRAGGIPLTPRQDSVG 757
            VVG+KPT GL  R G +      D +G
Sbjct:  185 VVGLKPTYGLVSRYGLVAFASSLDQIG 211          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_THIDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 65/181 (35.91%), Postives = 89/181 (49.17%), Query Frame = 3
Query:  129 QLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            QLA KQ  ++S +L + YL  I  LNP +N  I V+P+  L++A  AD    + A G+   L G+PI  KD   T D   TT GS  L   V P DA V+ + + AG   LGK ++ E+A   SSN  + F    G  KNP+     P              +   A GT+T GSI  P++
Sbjct:   12 QLAAKQ--VSSRELAQQYLDRIAALNPTINAFITVDPEKTLAEAAAADA---LIAGGAAGPLTGVPIAHKDIFCT-DGWLTTCGSKMLANFVAPYDAHVIERCKAAGMPSLGKTNMDEFA-MGSSNETSFF----GAVKNPWNAGYVPGGSSGGAAACVAARMAPAATGTDTGGSIRQPAA 181          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_PSEF5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gatA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 66/188 (35.11%), Postives = 91/188 (48.40%), Query Frame = 3
Query:  114 TINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSSPT 674
            T+ ++       K +S +L +  L  I +L+P +N  I +  D ALSQA  AD ERR  A G    L G PI  KD   T+  + T+ GS  L     P DA VV KL  AGA+ LGK ++ E+A   S+N  + +    G  KNP+ L   P              L+  A  T+T GSI  P++ T
Sbjct:    5 TLAEIARGLADKKFSSVELTQTLLARIAQLDPQINSFISLTQDLALSQAKAAD-ERR--ANGESGALLGAPIAHKDLFCTQG-IRTSCGSKMLDNFKAPYDATVVAKLAAAGAVTLGKTNMDEFA-MGSANESSWY----GAVKNPWNLEHVPGGSSGGSAAAVAARLLPAATATDTGGSIRQPAAFT 183          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_DEHSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain CBDB1) GN=gatA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = 3
Query:  114 TINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            TI       K  K++S +L + +L  I +L P +   + V P+ ALSQA+ AD   +    G +  L GIP+ LKD + TK  + TT  S  L   V P +A VV KL + GA++LGK ++ E+A   S+     F  R     NP+     P             +    +LG++T GSI  P+S
Sbjct:    8 TIAQSHKLLKDRKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD---KAIKQGDIRPLTGIPMALKDVLCTKG-IRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTR-----NPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPAS 184          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_CLOPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gatA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3
Query:  102 IREATINDLQLAFKQNKLTSWQLVEFYLGEIHRLNPVLNGVIEVNPD-ALSQADEADCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            I + T  +L    KQ +L+  + V+     I +  P  +  I VN + AL QA +             P L G+PI +KDNI  K  M TT  S  L   + P +A V+ +L++AGAIILGK ++ E+A   S+   + F    G  KNP+ +   P                 +ALGT+T GSI  PS+
Sbjct:    3 ITKLTAIELSKKIKQKELSVEEAVKATFSAIKKREPYYHSYITVNEEEALEQASKIQIAIEAGKFADSP-LAGVPIAIKDNICVKG-MRTTCASKILEDFIPPYNASVIERLKDAGAIILGKTNMDEFA-MGSTTETSYF----GATKNPWNIECIPGGSSGGSAAAVAAEEAFIALGTDTGGSIRQPSA 185          
BLAST of EY665532 vs. ExPASy Swiss-Prot
Match: GATA_RHOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodopirellula baltica GN=gatA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  150 KLTSWQLVEFYLGEIHRLNPVLNGVIEVNPDALSQADEA-DCERRVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLREAGAIILGKASLSEWANFRSSNAPNGFCARGGQGKNPYVLSADPWXXXXXXXXXXXXNLVAVALGTETDGSILSPSS 668
            ++T+ +++   L  I    P +N    V  +   QA EA D +R  KA  +L  L G+P+ +KD + T D M TT  S  L G V P DA VV +L+ AGAI++GK ++ E+A   S+       A G  G NP+  +  P               V ++LGT+T GSI  P++
Sbjct:   16 EVTAVEVIAQSLAAIRASQPTINAFTHVAEETAMQAAEAVDADR--KAGKTLGPLAGLPVAIKDVLCTSD-MPTTCSSKMLEGFVPPYDATVVARLKSAGAIVVGKTNMDEFAMGASTET----SAMGVTG-NPWDTTKTPGGSSGGAAAAVAAGAVPLSLGTDTGGSIRQPAA 181          
The following BLAST results are available for this feature:
BLAST of EY665532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
GATA_DEHSB5.608e-1432.80Glutamyl-tRNA(Gln) amidotransferase subunit A OS=D... [more]
GATA_BURPP5.608e-1434.21Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_COREF6.680e-1432.28Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_DESAD6.685e-1431.38Glutamyl-tRNA(Gln) amidotransferase subunit A OS=D... [more]
GATA_EXIS26.687e-1431.55Glutamyl-tRNA(Gln) amidotransferase subunit A OS=E... [more]
GATA_THIDA7.324e-1435.91Glutamyl-tRNA(Gln) amidotransferase subunit A OS=T... [more]
GATA_PSEF57.324e-1435.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_DEHSC7.324e-1432.80Glutamyl-tRNA(Gln) amidotransferase subunit A OS=D... [more]
GATA_CLOPH7.324e-1432.63Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_RHOBA9.565e-1433.91Glutamyl-tRNA(Gln) amidotransferase subunit A OS=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665532 ID=EY665532; Name=EY665532; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGAATAATGTGTCATTGACCTTTCCTTACTTTTCACATCTA
CTCCTGATTCTTCTAGCCATGTCAACCGATCGATCCGACGATGAATTCCC
AATAAGAGAGGCAACTATCAACGATCTCCAGCTCGCTTTCAAGCAAAACA
AGCTTACGTCCTGGCAGCTGGTTGAATTTTACCTCGGAGAAATCCACAGG
CTCAACCCGGTGCTCAACGGAGTCATAGAGGTGAACCCTGATGCACTATC
CCAAGCTGATGAAGCTGACTGCGAGCGCAGGGTTAAGGCACCAGGTTCAC
TGCCCGGTTTACATGGGATTCCTATTCTTCTCAAGGATAACATTGCAACG
AAGGACAAGATGAACACCACTGCTGGCTCGTATGCTCTGCTCGGCTCAGT
CGTGCCCCGGGATGCTGGTGTGGTGACCAAATTGAGGGAAGCTGGTGCCA
TTATTCTGGGAAAGGCTAGCTTGAGTGAGTGGGCTAATTTTAGATCCTCA
AATGCACCCAATGGTTTCTGTGCTAGGGGTGGCCAGGGAAAGAATCCATA
TGTTCTATCAGCAGATCCCTGGGGGTCGAGCAGTGGCTCAGCAATATCGG
TAGCAGGCAACTTGGTTGCAGTGGCACTGGGAACTGAAACTGATGGGTCA
ATTCTCTCTCCTTCCAGTCCAACTCAGTAGTGGGAATCAAACCAACGGTT
GGGCTCACCCGCAGAGCCGGCGGCATCCCTTTAACTCCTAGGCAGGACTC
CGTTGGGGAATGGGAACCTTTGCCATATCATTTTGATGGCCGTTACCCTT
TAATTGACAAGGGACTATCTGCCCCGGGAGGCCTTATTTGCAAACTGGGA
GCGGAGGCTGCTTTATGGTGCTGGACGCCACTGGCGGGGATTGGTTCCCG
AGGAGCCCGG
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