CX043299

Overview
NameCX043299
Unique NameCX043299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.015e-56
Identity = 121/293 (41.30%), Postives = 173/293 (59.04%), Query Frame = 2
Query:    2 FSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGK---PQWKQVFLPSWH------STECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSM 847
            F  I  L+  G+ LP +          P +LVK  I   GD +L    P  +  DK  W  D+EF+R+ LAG+NP  I  +TE+P +S LDP  YG   S IT   +E+ + G+ +V++AI    L+++D+HD F+PY+  +  L    +Y +RT+ FL   GTL P+AIEL+ P +           V+ P+        + E W+W+LAKA+V  +D  +HQL+SHWL TH   EP+VIATNRQLSV HP+++LL PH+R TM IN LARQ L+N  GI E +  P K+++
Sbjct:  299 FKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIREDKKAWMTDDEFAREILAGVNPMVIARLTEFPPRSRLDPARYGDQTSTITAAHVERGLEGL-TVQQAIDGNLLYVVDHHDHFMPYLLDINSLDDNFIYATRTLLFLRGDGTLAPLAIELSLPHLQDDGLITARSTVYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHWLNTHAVMEPFVIATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHAL 590          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 81/283 (28.62%), Postives = 132/283 (46.64%), Query Frame = 2
Query:    2 FSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWL-WKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSM 847
            F+A+ A F   +    L ++G W  L         D   NI       T +     W  D  F  Q L G+NP  +  ++  P K              +T +++   +G    ++  +++  +F+ DY  L    V  +  L+         + +L P G L P+AI+L++ P    P    +FLP    T+C L W LAK  V   +   H+  +H+L TH   E + +AT RQL + HP+Y+LL PH RYT+++N +AR  L+N DG+++   S G+  +
Sbjct:  222 FNALPASFGMKIR-GLLDRKGSWKRL---------DDIRNIFWCHKTFTSEYVTEHWCEDSFFGYQYLNGVNPVMLHCLSSLPSKLP------------VTNDMVAPLLGPGTCLQTELERGHIFLADYWILAEAPVHCINSLQQYVT-APLCLLWLNPQGVLLPLAIQLSQTPGPESP----IFLP----TDCELDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFSMATLRQLPLCHPVYKLLLPHTRYTLQVNTIARATLLNPDGLVDKVTSIGRQGL 473          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 71/228 (31.14%), Postives = 111/228 (48.68%), Query Frame = 2
Query:  152 DRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            +R K  W  D  F  Q L G NP  I+  T  P            P+  +TTE++E  +   +S+E+ +++  +FI+DY  L      K        L     + +   A  + PIAI+L + P    P    +FLP+    +   W LAK  V + D   HQ ++H LRTH  +E + IA  RQL  +HP+++LL  H R+T+ IN  AR+ L+   G+ + + + G
Sbjct:  221 ERVKNHWQEDLMFGYQFLNGCNPVLIKRCTALP------------PKLPVTTEMVECSLERQLSLEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGESNP----IFLPTDSKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATG 429          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22
Identity = 73/222 (32.88%), Postives = 109/222 (49.10%), Query Frame = 2
Query:  170 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            W  D  F  Q L G NP  IR  TE P K              +TTE++E  +   +S+E+ ++Q  +FI+D+  L      K        L     + +   A  + PIAI+L + P +  P    +FLPS    +   W LAK  V + D   HQ ++H LRTH  +E + IA  RQL  +HPI++LL  H R+T+ IN  AR+ L+   G+ + + + G
Sbjct:  227 WQEDLMFGYQFLNGCNPVLIRRCTELPEKLP------------VTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATG 429          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22
Identity = 72/228 (31.58%), Postives = 110/228 (48.25%), Query Frame = 2
Query:  152 DRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            +R K  W  D  F  Q L G NP  I+  TE P K              +TTE++E  +   +S+E+ +++  +FI+DY  L      K        L     + +   A  + PIAI+L + P    P    +FLP+    +   W LAK  V + D   HQ ++H LRTH  +E + IA  RQL  +HP+++LL  H R+T+ IN  AR+ L    G+ + + + G
Sbjct:  220 ERVKNHWQEDLMFGYQFLNGCNPVLIKRCTELPKKLP------------VTTEMVECSLERQLSLEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGEKNP----IFLPTDSKYD---WLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLNCEYGLFDKANATG 428          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOXE3_HUMAN (Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21
Identity = 66/226 (29.20%), Postives = 112/226 (49.56%), Query Frame = 2
Query:  170 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSM 847
            W  D  F  Q L G+NP  +  I+  P K              +T +++   +G    ++  +++  +F+ DY  L       +   +   +     + +L+P G L P+AI+L++ P    P    +FLP+      W W LAK  V   +   H+  +H+L TH   E + +AT RQL + HPIY+LL PH RYT+++N +AR  L+N +G+++   S G+  +
Sbjct:  268 WCEDHFFGYQYLNGVNPVMLHCISSLPSKLP------------VTNDMVAPLLGQDTCLQTELERGNIFLADYWILAEAPTHCLNG-RQQYVAAPLCLLWLSPQGALVPLAIQLSQTPGPDSP----IFLPTDSE---WDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFAMATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGL 473          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LX12E_MOUSE (Arachidonate 12-lipoxygenase, epidermal-type OS=Mus musculus GN=Alox12e PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21
Identity = 81/228 (35.53%), Postives = 106/228 (46.49%), Query Frame = 2
Query:  152 DRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            +R +  W  D  F  Q L G NP  +R     P +  L P +       + T+L           E+ +K   LF +D+  L       +   K   +     +  L P G L P+ I+L +PP +G P    +FLPS        W LAK  V + D   HQL SH LR H   E   +AT R L  +HPIY+LL PHFRYTMEIN LAR  LV+  GI +   S G
Sbjct:  216 ERVRGSWKEDALFGYQFLNGANPMLLRRSMRLPARLVLPPGM-----EDVQTQL-----------EKELKAGSLFEVDF-SLLDGVKPNIIIFKQQYVTAPLVMLKLQPDGRLLPMVIQL-QPPRHGCPP-PLLFLPS---DPPMAWLLAKIWVRSSDFQLHQLQSHLLRGHLMAEVISVATMRSLPSLHPIYKLLAPHFRYTMEINTLARNNLVSEWGIFDLVVSTG 421          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 72/228 (31.58%), Postives = 109/228 (47.81%), Query Frame = 2
Query:  152 DRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            +R K  W  D  F  Q L G NP  I+   E P K              +TTE++E  +   +S+E+ +++  +FI+DY  L      K        L     + +   A  + PIAI+L + P    P    +FLPS    +   W LAK  V + D   HQ ++H L TH  +E + IA  RQL  +HPI++LL  H R+T+ IN  AR+ L+   G+ + + + G
Sbjct:  220 ERVKNHWQEDLMFGYQFLNGCNPVLIKRCRELPQKLP------------VTTEMVECSLERHLSLEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQAPGEKNP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLCTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATG 428          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LX15B_RAT (Arachidonate 15-lipoxygenase B OS=Rattus norvegicus GN=Alox15b PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21
Identity = 70/223 (31.39%), Postives = 106/223 (47.53%), Query Frame = 2
Query:  170 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTP-AGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            W  D  F+ Q L GLNP  IR     P                +T E++   +G   S++  +++  LF++D H +       V   K        T+ + +P +G L PIAI+L + P    P    +FLPS    + W W LAK  V   +   H+ ++H L  H   E + +AT RQL   HP+++LL PH RYT+ IN LAR+ L+    +++ S   G
Sbjct:  233 WQEDAFFASQFLNGLNPVLIRRCRRLP------------ENFPVTDEMVAPVLGPGTSLQAELEKGSLFLVD-HGILSGVQTNVINGKPQFSAAPMTLLYQSPGSGPLLPIAIQLKQTPGPDNP----IFLPS---DDKWDWLLAKTWVRNAEFSIHEALTHLLHAHLIPEVFALATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIAPGKVVDKSTGLG 435          
BLAST of CX043299 vs. ExPASy Swiss-Prot
Match: LX15B_HUMAN (Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=ALOX15B PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21
Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 2
Query:  170 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPA-GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 835
            W  D  F+ Q L GLNP  IR               Y P    +T  ++   +G   S++  +++  LF++D H +       V   K        T+ + +P  G L P+AI+L++ P    P    +FLP+    + W W LAK  V   +  +H+ ++H L +H   E + +AT RQL   HP+++LL PH RYT+ IN LAR+ L+    +++ S   G
Sbjct:  232 WQEDAFFASQFLNGLNPVLIRRCH------------YLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVD-HGILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSP----IFLPT---DDKWDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIVPGQVVDRSTGIG 434          
The following BLAST results are available for this feature:
BLAST of CX043299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX2_ORYSJ9.015e-5641.30Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOXE3_MOUSE5.898e-2328.62Epidermis-type lipoxygenase 3 OS=Mus musculus GN=A... [more]
LOX5_MOUSE1.314e-2231.14Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alo... [more]
LOX5_HUMAN2.927e-2232.88Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
LOX5_RAT8.517e-2231.58Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]
LOXE3_HUMAN1.112e-2129.20Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=A... [more]
LX12E_MOUSE3.236e-2135.53Arachidonate 12-lipoxygenase, epidermal-type OS=Mu... [more]
LOX5_MESAU4.227e-2131.58Arachidonate 5-lipoxygenase OS=Mesocricetus auratu... [more]
LX15B_RAT7.210e-2131.39Arachidonate 15-lipoxygenase B OS=Rattus norvegicu... [more]
LX15B_HUMAN9.416e-2130.49Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10B07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10B07-D14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043299 ID=CX043299; Name=CX043299; organism=Citrus sinensis; type=EST; length=847bp
CTTCTCTGCTATTGACGCACTCTTCAATGAAGGAGTCAACTTGCCTCCAC
TCAAACAGGAAGGTTTTTGGAACACACTGCTTCCCAGATTGGTTAAGGCA
ATTGAGGATACAGGAGATAATATTTTGCTGTTTGAGACGCCAGAAACAAT
GGACAGAGACAAATTCTTTTGGTTTAGGGATGAGGAATTTTCTAGGCAAA
CTCTCGCTGGTCTCAACCCGTATAGCATAAGGTTGATCACGGAATGGCCG
TTGAAAAGCACACTCGATCCTGAAATTTACGGACCACCAGAATCAGCAAT
TACCACAGAATTGATTGAAAAAGAAATTGGAGGAATGATTTCTGTTGAAG
AGGCTATAAAACAAAAGAAGTTGTTCATCTTAGATTACCATGACCTATTT
TTACCATATGTGGAAAAAGTGAGACAACTCAAAAGCACAACGTTGTATGG
ATCTCGCACAATTTTCTTCCTAACACCAGCCGGCACATTGAGACCAATAG
CTATTGAGCTCACTCGGCCTCCAATGAATGGCAAGCCACAATGGAAACAA
GTGTTTTTACCTTCTTGGCACTCTACTGAGTGCTGGCTTTGGAAGCTAGC
CAAAGCTCATGTCCTTGCTCATGATGCTGGCTATCACCAGCTTGTCAGCC
ATTGGTTAAGAACTCATTGTTGCACAGAACCTTACGTAATAGCAACCAAT
CGGCAACTCAGCGTGATGCATCCAATCTATAGATTGTTGGATCCTCATTT
TCGATACACAATGGAGATCAATGGTTTGGCTCGACAAGCTCTTGTTAATG
CTGATGGAATCATTGAAAGCTCATTCTCACCTGGAAAGTACTCTATG
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