CX674384

Overview
NameCX674384
Unique NameCX674384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.166e-14
Identity = 44/158 (27.85%), Postives = 80/158 (50.63%), Query Frame = -2
Query:  409 CNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLT 879
            C  C G G  +  KDRCP C G+ + Q +  +++ V  G+Q+G  +T  G+ +  P     GD++ V+++K H  FKR G+D+ Y+ ++   + + G +  +  LDG    +K       +P++   I  +G+  + R    G LY+   V  P  ++
Sbjct:  214 CPTCGGEGRVV--KDRCPSCYGEGIKQGEATVKITVPAGVQDGNYLTLQGQGNAGPRGGAPGDLIVVIEEKPHELFKRNGDDIIYDLSVGFPDLVMGTKIEVPTLDGH---VKLTIPAGTQPNTMLRIGGKGIG-HLRGGGSGDLYVRVNVFVPKEVS 365          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFT (Chaperone protein dnaJ OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.359e-14
Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTV-TGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQ-RPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            MQ  C  C G G  I  ++ C  C G    ++ K L V +  G+ NG +I   GE ++ PD V  GD+   ++ +EHP F+R G+DL  E  + +++A  G    +  LDG   +    P E     S K     G  +   R   +G LY    VE P +LT +Q K LE
Sbjct:  171 MQQTCPHCGGRGVII--RNPCKVCNGAGRVEDHKTLSVKIPAGVDNGDRIRLSGEGEQGPDGVPPGDLYVEVRVREHPIFQRDGDDLHCEVPVRISQAALGDIVRVATLDGEAEI--RIPAET---QSGKLFRLRGKGVRSVRSRTEGDLYCRIVVETPVNLTAEQRKLLE 334          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFM (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.359e-14
Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTV-TGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQ-RPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            MQ  C  C G G  I  ++ C  C G    ++ K L V +  G+ NG +I   GE ++ PD V  GD+   ++ +EHP F+R G+DL  E  + +++A  G    +  LDG   +    P E     S K     G  +   R   +G LY    VE P +LT +Q K LE
Sbjct:  171 MQQTCPHCGGRGVII--RNPCKVCNGAGRVEDHKTLSVKIPAGVDNGDRIRLSGEGEQGPDGVPPGDLYVEVRVREHPIFQRDGDDLHCEVPVRISQAALGDIVRVATLDGEAEI--RIPAET---QSGKLFRLRGKGVRSVRSRTEGDLYCRIVVETPVNLTAEQRKLLE 334          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLF2 (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.359e-14
Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTV-TGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQ-RPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            MQ  C  C G G  I  ++ C  C G    ++ K L V +  G+ NG +I   GE ++ PD V  GD+   ++ +EHP F+R G+DL  E  + +++A  G    +  LDG   +    P E     S K     G  +   R   +G LY    VE P +LT +Q K LE
Sbjct:  171 MQQTCPHCGGRGVII--RNPCKVCNGAGRVEDHKTLSVKIPAGVDNGDRIRLSGEGEQGPDGVPPGDLYVEVRVREHPIFQRDGDDLHCEVPVRISQAALGDIVRVATLDGEAEI--RIPAET---QSGKLFRLRGKGVRSVRSRTEGDLYCRIVVETPVNLTAEQRKLLE 334          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIRD (Chaperone protein dnaJ OS=Rhizobium radiobacter GN=dnaJ PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.359e-14
Identity = 51/170 (30.00%), Postives = 81/170 (47.65%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            ++  C  C G G+TI+D   C +C G     E++ L V +  G+++G +I   GE +        GD+   L  + H  F+R G DL+    +S+T A  G  F +T LDG +  +    G   +P     +  +GMP+  R    G LYI   +E P  L+  Q + L+
Sbjct:  188 VERTCPTCHGRGQTISDP--CGKCHGQGRVTEERSLSVNIPSGIEDGTRIRLQGEGEAGMRGGPAGDLYIFLSVRPHEFFQRDGADLYCTVPISMTTAALGGTFDVTTLDGTKSRVTVPEG--TQPGKQFRLKGKGMPVL-RSAQTGDLYIQIQIETPQKLSKRQRELLQ 352          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_AGRT5 (Chaperone protein dnaJ OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaJ PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.359e-14
Identity = 51/170 (30.00%), Postives = 81/170 (47.65%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            ++  C  C G G+TI+D   C +C G     E++ L V +  G+++G +I   GE +        GD+   L  + H  F+R G DL+    +S+T A  G  F +T LDG +  +    G   +P     +  +GMP+  R    G LYI   +E P  L+  Q + L+
Sbjct:  186 VERTCPTCHGRGQTISDP--CGKCHGQGRVTEERSLSVNIPSGIEDGTRIRLQGEGEAGMRGGPAGDLYIFLSVRPHEFFQRDGADLYCTVPISMTTAALGGTFDVTTLDGTKSRVTVPEG--TQPGKQFRLKGKGMPVL-RSAQTGDLYIQIQIETPQKLSKRQRELLQ 350          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_RHISN (Chaperone protein dnaJ OS=Rhizobium sp. (strain NGR234) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            ++  C  C G G+TI D   C +C G     E++ L V +  G+++G +I   GE +        GD+   L  K H  ++R G DL+    +S+T A  G +F +T LDG +  +    G   +      +  +GMP+  R    G LYI   +E P  LT  Q + L+
Sbjct:  185 IERTCPTCGGRGQTITDP--CTKCHGQGRVTEERTLSVNIPTGIEDGTRIRLSGEGEAGLRGGPAGDLYIFLSVKPHEFYQRDGADLYCSVPISMTTAALGGKFDVTTLDGTKSRVTVPEG--TQAGKQFRLKGKGMPVL-RSNQTGDLYIQIQIETPQKLTKRQRELLQ 349          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ2_STRCO (Chaperone protein dnaJ 2 OS=Streptomyces coelicolor GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 51/174 (29.31%), Postives = 83/174 (47.70%), Query Frame = -2
Query:  367 PCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPL-YQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSR 882
            PC +C+G G  +     CP+C GD   + ++ L V +  G+ NG +I   GE +  P     GD+   + +  H  F+R+G+DL    T+ +T A  G +  L  LDG +  +   PG      S ++I + G  + + R   +G L +H  V  P  L P+Q + L  +   R
Sbjct:  185 PCPQCQGFGTVVPTP--CPECAGDGRVRSRRTLTVKIPAGVDNGTRIQLAGEGEVGPGGGPAGDLYVEIHELPHSTFQRRGDDLHCTVTIPMTAAALGTKVPLETLDGME-EVDIRPG----TQSGQSIPKHGRGVTHLRGGGRGDLIVHVEVTTPGKLDPEQERLLRELAKLR 351          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_SINMW (Chaperone protein dnaJ OS=Sinorhizobium medicae (strain WSM419) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            ++  C  C G G+TI D   C +C G     E++ L V +  G+++G +I   GE +        GD+   L  K H  ++R G DL+    +S+T A  G +F +T LDG +  +    G   +      +  +GMP+  R    G LYI   +E P  LT  Q + L+
Sbjct:  181 IERTCPTCGGRGQTITDP--CTKCHGQGRVVEERTLSVNIPAGIEDGTRIRLSGEGEAGLRGGPAGDLYIFLSVKPHEFYQRDGADLYCAVPISMTTATLGGKFDVTTLDGTKSRVTVPEG--TQAGKQFRLKGKGMPVL-RSSQMGDLYIQIQIETPQKLTKRQRELLQ 345          
BLAST of CX674384 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILW (Chaperone protein dnaJ OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = -2
Query:  385 MQHPCNECKGTGETINDKDRCPQCKGDKVFQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 891
            ++  C  C G G+ I D   CP+C G     E++ L V +  G+++G +I   GE +  A     GD+   L  K H  ++R G DL+    +S+T A  G  F +  LDG +  +    G   +      +  +GMP+  R    G LYI   +E P  LT  Q + L+
Sbjct:  185 IERTCPTCHGRGQIIPDP--CPKCHGQGRVTEERSLSVNIPAGIEDGTRIRLQGEGEAGARGGPAGDLYIFLSVKPHEFYQRDGADLYCAVPISMTTAALGGTFDVATLDGTKSRVSVPEG--TQAGKQFRLKSKGMPVL-RSAQTGDLYIQIQIETPQKLTKRQRELLQ 349          
The following BLAST results are available for this feature:
BLAST of CX674384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
DNAJ_CHLTE7.166e-1427.85Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_XYLFT9.359e-1432.75Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XYLFM9.359e-1432.75Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XYLF29.359e-1432.75Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_RHIRD9.359e-1430.00Chaperone protein dnaJ OS=Rhizobium radiobacter GN... [more]
DNAJ_AGRT59.359e-1430.00Chaperone protein dnaJ OS=Agrobacterium tumefacien... [more]
DNAJ_RHISN1.596e-1330.00Chaperone protein dnaJ OS=Rhizobium sp. (strain NG... [more]
DNAJ2_STRCO1.596e-1329.31Chaperone protein dnaJ 2 OS=Streptomyces coelicolo... [more]
DNAJ_SINMW2.085e-1330.00Chaperone protein dnaJ OS=Sinorhizobium medicae (s... [more]
DNAJ_RHILW2.085e-1330.00Chaperone protein dnaJ OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_6B07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-6B07-C14-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674384 ID=CX674384; Name=CX674384; organism=Citrus sinensis; type=EST; length=895bp
TTTTAAAAGAAGGCATTTCATTGCTTTAAAAAAATCTAGTAAACAAAAAA
CACTGTAAACATCAAAGCGTCCACAGCTTTGAGCATCAGACAAATATGCT
ATTCAAATTATCTTTCCTTAGTACTGAAAATTAGCTTCATTTTAGTATGC
GTACAACAACTTAAAACCACTTTCAATGATTGTTCTTCGCCATCATCACT
GTTGGGCACACTGCACTCTCTGGGCACCACCAGGCATATCTTCGTCCTCC
TCATATGCCTCTTGAGCATGAGCCTGCTTCCTCCGCATCTCCTCCTCAAT
GTTGACATCATGCAATGTAGTCTCTTCACATTCATCTAGCTCCATGTCAG
TCATCCCAGACAATGGCCTCGATGGGAGGATGGCCTCTAGGGCCTTAACC
TGATCTGGGGTCAGAGAATCAGGGAATTCGACTGTGAAGTGAATGTACAG
TTTCCCCTTCATGAACGGCCTCTGGTACAAGGGCATACCCTCCTCATTGA
TAGCCTTGTATGAATCAGGCTTAACAACTTCCCCAGGATTCGATTTAATC
AGAAGTTGCCTCCCATCCAGATGAGTCAGTGCAAACTGGAAACCGCAGAG
GGCCTCAGTTAGCGACAAAGTATGCTCATAAAAGAGATCTTCTCCCTTTC
TCTTGAACTTTGGATGTTCCTTCTGCTGAAGTACAAATACTATGTCTCCA
GTGACTGTATCTGGCGCTTCATCTGCTTCACCAGGGAAGGTAATCTTCTG
CCCATTTTGCATGCCCTTCTCAACAATGACCTCAAGCACCTTTTTCTCCT
GAAACACCTTGTCTCCCTTGCACTGAGGGCAGCGATCTTTATCGTTGATG
GTCTCACCGGTACCCTTGCATTCATTGCAAGGATGCTGCATCTGC
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