EY665520

Overview
NameEY665520
Unique NameEY665520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665520 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 2.165e-11
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 1
Query:   76 MTPLGLTPTEGDLHNMINELYADDHGTLHVPEYLILLDPNMLDCHSWDELTYAFPCY 246
            M  LG  PTE +L +MI+E  AD +GT+  PE+L L+   M D  S +EL  AF  +
Sbjct:   37 MRSLGQNPTEAELQDMISEADADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVF 93          

HSP 2 Score: 31.9574 bits (71), Expect = 2.165e-11
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    6 RPAFSLFDCDVDRCLTTKELVAV 74
            + AFSLFD D D C+TTKEL  V
Sbjct:   14 KEAFSLFDKDGDGCITTKELGTV 36          

HSP 3 Score: 29.261 bits (64), Expect = 2.165e-11
Identity = 15/52 (28.85%), Postives = 23/52 (44.23%), Query Frame = 2
Query:  254 DLRGLFSSTEMLQDITILSEKLHRSSTYETLFAPDAYADAHITYQELAHVLL 409
            D  G  S+ E+   +T L EKL      E +   D   D  + Y+E   ++L
Sbjct:   96 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMML 147          
BLAST of EY665520 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 51.9878 bits (123), Expect = 4.673e-11
Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 1
Query:   76 MTPLGLTPTEGDLHNMINELYADDHGTLHVPEYLILLDPNMLDCHSWDELTYAFPCY 246
            M  LG  PTEG+L +MINE+ AD +GT+  PE+L ++   M D  S +E+  AF  +
Sbjct:   37 MRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVF 93          

HSP 2 Score: 28.1054 bits (61), Expect = 4.673e-11
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 3
Query:    6 RPAFSLFDCDVDRCLTTKELVAV 74
            + AFSLFD D D  +TTKEL  V
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTV 36          

HSP 3 Score: 28.1054 bits (61), Expect = 4.673e-11
Identity = 16/52 (30.77%), Postives = 23/52 (44.23%), Query Frame = 2
Query:  254 DLRGLFSSTEMLQDITILSEKLHRSSTYETLFAPDAYADAHITYQELAHVLL 409
            D  G  S+ E+   +T L EKL  +   E +   D   D  I Y E   ++L
Sbjct:   96 DGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMML 147          
BLAST of EY665520 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 48.9062 bits (115), Expect = 4.673e-11
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 1
Query:   76 MTPLGLTPTEGDLHNMINELYADDHGTLHVPEYLILLDPNMLDCHSWDELTYAFPCY 246
            M  LG  PTE +L +MI+E+ AD +GT+  PE+L L+   M D  S +EL  AF  +
Sbjct:   37 MRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVF 93          

HSP 2 Score: 31.9574 bits (71), Expect = 4.673e-11
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    6 RPAFSLFDCDVDRCLTTKELVAV 74
            + AFSLFD D D C+TTKEL  V
Sbjct:   14 KEAFSLFDKDGDGCITTKELGTV 36          

HSP 3 Score: 27.335 bits (59), Expect = 4.673e-11
Identity = 14/52 (26.92%), Postives = 23/52 (44.23%), Query Frame = 2
Query:  254 DLRGLFSSTEMLQDITILSEKLHRSSTYETLFAPDAYADAHITYQELAHVLL 409
            D  G  S+ ++   +T L EKL      E +   D   D  + Y+E   ++L
Sbjct:   96 DQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMML 147          
BLAST of EY665520 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 48.521 bits (114), Expect = 6.039e-11
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 1
Query:   76 MTPLGLTPTEGDLHNMINELYADDHGTLHVPEYLILLDPNMLDCHSWDELTYAFPCY 246
            M  LG  PTE +L +MINE+ AD +GT+  PE+L L+   M +  S +EL  AF  +
Sbjct:   37 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVF 93          

HSP 2 Score: 32.3426 bits (72), Expect = 6.039e-11
Identity = 17/52 (32.69%), Postives = 25/52 (48.08%), Query Frame = 2
Query:  254 DLRGLFSSTEMLQDITILSEKLHRSSTYETLFAPDAYADAHITYQELAHVLL 409
            D  GL S+ E+   +T L EKL      E +   D   D HI Y+E   +++
Sbjct:   96 DGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 147          

HSP 3 Score: 26.9498 bits (58), Expect = 6.039e-11
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 3
Query:    6 RPAFSLFDCDVDRCLTTKELVAV 74
            + AF+LFD D D  +TTKEL  V
Sbjct:   14 KEAFALFDKDGDGTITTKELGTV 36          
BLAST of EY665520 vs. ExPASy Swiss-Prot
Match: CALL3_MOUSE (Calmodulin-like protein 3 OS=Mus musculus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 7.803e-11
Identity = 22/54 (40.74%), Postives = 32/54 (59.26%), Query Frame = 1
Query:   76 MTPLGLTPTEGDLHNMINELYADDHGTLHVPEYLILLDPNMLDCHSWDELTYAF 237
            M  LG  PTE +L  M+NE+  D +GT+  PE+L ++   M D  S +E+  AF
Sbjct:   37 MRSLGQNPTEAELQGMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAF 90          

HSP 2 Score: 33.4982 bits (75), Expect = 7.803e-11
Identity = 17/52 (32.69%), Postives = 25/52 (48.08%), Query Frame = 2
Query:  254 DLRGLFSSTEMLQDITILSEKLHRSSTYETLFAPDAYADAHITYQELAHVLL 409
            D  G  S+ E+   +T L EKL      E + A D   D  + Y+E  H+L+
Sbjct:   96 DGNGFVSAAELRHVMTKLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLV 147          

HSP 3 Score: 26.5646 bits (57), Expect = 7.803e-11
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 3
Query:    6 RPAFSLFDCDVDRCLTTKELVAV 74
            + AFSLFD D D  +TT+EL  V
Sbjct:   14 KEAFSLFDKDGDGSITTQELGTV 36          
The following BLAST results are available for this feature:
BLAST of EY665520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CALM1_SOLTU2.165e-1143.86Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]
CALM_PAXIN4.673e-1143.86Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM2_PETHY4.673e-1143.86Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]
CALM_PARTE6.039e-1143.86Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALL3_MOUSE7.803e-1140.74Calmodulin-like protein 3 OS=Mus musculus GN=Calml... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665520 ID=EY665520; Name=EY665520; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGCCTTCAGCTTGTTTGACTGTGATGTGGACAGATGCCTT
ACCACCAAGGAGCTTGTTGCTGTCTATGACGCCCCTGGGGCTTACCCCCA
CTGAGGGTGACCTCCACAACATGATCAATGAACTGTATGCTGATGACCAT
GGAACTCTTCATGTTCCTGAATACCTTATCCTCTTGGACCCGAACATGCT
TGATTGCCACTCTTGGGACGAGCTTACCTATGCCTTCCCCTGTTATCTGA
CATGACTTGAGAGGTCTCTTCTCATCTACTGAGATGCTCCAAGATATCAC
AATTCTATCAGAGAAGCTTCATCGCTCCTCAACTTATGAGACTCTCTTCG
CTCCTGATGCTTATGCTGATGCTCACATAACTTATCAGGAACTTGCCCAC
GTCCTTCTGCACCATGCATGCCCTCAACCCTCCTGTACTCACTGATGCGC
TGATCTCTGTATCAAGGTCTTCCTACGTCTCCCACATGCCATCAATATTA
TACTATCCATGAGGCTCTAGCTGACTGTCTGGATGGCCTCCTAATGATGA
TTGCACCGATCGTCCATATAAGAAAGCCTCTCTCTCGGCCATATGCCTGT
TGACTGGAAAAACTCCTCCTGCTTTATCAAAGTGCAAACACCTGCCACCA
TTAGATTGTGCGTGTCAGTATAGTAATCAGGAAAGTGGCCAGAGCAATGG
GGAGGTTGGCCATGCTCAGAGGGAAGAACTCCCGTACAACAGGGTCCCGG
GGAGAGAATACCCCCGAAATCGGGAATCCTCGGAACCTAGAGGTTTTAGG
GGTAGGATAGAGGGCGTAGGTTGGGGGGGTTCGGGGTAGAAGCTCGGGGG
GAGCTCGGCGGGCGTGCTTTCTCTCCTCGGAAACC
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