EY665514

Overview
NameEY665514
Unique NameEY665514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665514 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOL6 (Uncharacterized aminotransferase yfbQ OS=Escherichia coli O6 GN=yfbQ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.044e-12
Identity = 47/179 (26.26%), Postives = 83/179 (46.37%), Query Frame = 1 
Query:  148 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSAYISPLGGSLVPYYLGKTANW 684
            +  ++ V Y +RG +   A  L++EG K++  N+GNP                   APF  D P+  +V     +  A+            Y DS+G+   RK + +  + R       E I++ +G S+ ++Q +  ++   GD +LVP P YPL++A +S   G  V Y   ++++W
Sbjct:    7 SSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNP-------------------APFGFDAPDEILVDVIRNLPTAQ-----------GYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDW 154
The following BLAST results are available for this feature:
BLAST of EY665514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
YFBQ_ECOL66.044e-1226.26Uncharacterized aminotransferase yfbQ OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665514 ID=EY665514; Name=EY665514; organism=Citrus sinensis; type=EST; length=840bp
CCACGCGTCCGGCATTTTTCTGTGCACGTCAGTGTAGTTGTACATTCAAT
TGGCTCGAGCCGAAGTTAGCGCACAAGCACTCTCTCAGTTAAGATCCCAG
GCGTTTAGTACATCATGGCACCAAAGGCATTGGACTATGAGTCTATGAAT
GAAAACGTGAAGAAGGTTCAATATGCTGTTAGAGGAGAGTTGTATCTTCG
AGCTTCTGAGCTTCAGAAGGAAGGGAAGAAGATTATTTTTACAAATGTTG
GCAACCCTCATGCTCTGGGACAGAGGCCATTGACCTTCCCTCGGCAGGTG
GTTGCTCTTTGCCAGGCTCCATTTTTGCTAGATGATCCTAATGTAGGAAT
TGTCTTCCCTGCTGATGCAATTGCAAGAGCTAAACATTATCTTTCCCTGA
CTTCAGGGGGTCTAGGTGCTTACAGTGACTCCAGAGGTATTCCAGGTGTA
AGGAAGGAAGTAGCAGAGTTCATTGAAAGGCGTGATGGTTATCCAAGTGA
CCCAGAACTCATATTTCTCACTGATGGTGCCAGCAAAGGAGTTATGCAGA
CTTTAAATTGTGTCATCCGTGGTGAAGGGGATGGGGTTTTGGTTCCAGTT
CCACAGTACCCACTGTACTCAGCTTACATATCTCCTTTAGGTGGGTCTCT
TGTTCCATACTACCTTGGAAAGACAGCAAATTGGGGTCTTTGATATTAAT
GACCCTCCGCGGGCCGGTGCACCCGCTCCGGCCTAAAGGGCATCCGGGCA
AAACAGCGGGGAAGAGTGACTCCTGCCGGCTCAAAGCCGGCGGCGTATTC
GACGAGAAGTGCGCCGAGGGGAAGATTTTNCAAATTACCA
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