EY665513

Overview
NameEY665513
Unique NameEY665513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26
Identity = 75/241 (31.12%), Postives = 130/241 (53.94%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGI-----DAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + I VRR +++ED + QL    ++ LK  + V F  E G+     D GGL++E+   +++  F     LF+ T  ++    P+P++ +    +   +F+GR+VGKAL++G LLD  F+  F + +LG      ++  +DP+ ++NL ++   D  D+ +L       EE        +++  EL PGG++  VT ENK QY+  +A+++L   I P  NAF  G T+LI    + +F+  E
Sbjct:  774 IEIVVRRGHVVEDGFQQLNSIGSR-LKSSIHVSFVNESGLPEAGLDYGGLSKEFLTDITKAAFATEYGLFSQTPTSDRLLVPSPSARHLENGIQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLGRYSFIDELSGLDPELYRNLMYVKHYD-GDLKELCLDFTVTEEFC-----GKMSIIELKPGGKDTSVTNENKMQYIHAMADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHE 1007          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26
Identity = 79/246 (32.11%), Postives = 132/246 (53.66%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNS--VYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVK--VTYHDIEAIDPDYFKNLKWM--LENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + +++RR YI ED+Y++L   +  DLK R+ VH        E GID GG+ RE+   L +  F+     F T  NE    PNP +  +       ++ F+GR++GKAL++  L+++ F   F   +LG    V  H + ++DP+ ++NL ++   E D+ + L L F++  ++        AQV + +   GG++I VT  N+  Y+ LVA++RL   IRP   AF +G   ++  E + +F  QE
Sbjct:  723 INVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTT-NEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEE-LGLNFTVVNND-----LGEAQVVELKF--GGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQE 959          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26
Identity = 73/224 (32.59%), Postives = 130/224 (58.04%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQ---DLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGF 684
            LR+ VRR +I++D+  +L M + +   DLK +L V F+GE+G+D GG+++E++QL+   IF+    +FT   +   F  NP+S ++TE    F  +G V+G A+++  +LDVHF    Y+ ++G K T+ D+    P  +++LK +L  E ++ D + +TF I   +    L+    +  Y+L   G  I +T EN+ ++V+L +++ L  ++     AF  GF
Sbjct:  523 LRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWFNPSS-FETE--GQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTD----LFGNPMM--YDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGF 737          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 2.620e-26
Identity = 79/246 (32.11%), Postives = 132/246 (53.66%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNS--VYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVK--VTYHDIEAIDPDYFKNLKWM--LENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + +++RR YI ED+Y++L   +  DLK R+ VH        E GID GG+ RE+   L +  F+     F T  NE    PNP +  +       ++ F+GR++GKAL++  L+++ F   F   +LG    V  H + ++DP+ +KNL ++   E+D+ + L L F++  ++        AQV + +   GG++I VT  N+  Y+ LVA++RL   IR    AF +G   ++  E + +F  QE
Sbjct:  723 INVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTT-NEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEDDVEE-LGLNFTVVNND-----LGEAQVVELKF--GGKDIPVTSANRIAYIHLVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQE 959          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.956e-26
Identity = 80/246 (32.52%), Postives = 125/246 (50.81%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-----STFQPNPNSVYQTEHLS---YFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLE---NDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L+I VRR ++  DS   ++ +  +DLK  L + F  E GIDAGGL +EW+ LL+R +F+    LF  V        S  +   + + Q E  S   Y+ F G V+G A+++  +LD+ F R+FYK I G  ++ +D   + P+   N+  MLE    D  D+  LTF     +     ++ +++   +L P G    VT ENKH+Y  L  +  L  +I P   +F  GF  +I G    +F  +E
Sbjct:  477 LKIRVRREFVTTDSLRSIQNQQ-KDLKKSLRIEFVNEPGIDAGGLRKEWFLLLTRDLFNPNNGLFVYVPESRLCWFSIMESIEHELLQGEGSSSELYYLF-GVVLGLAIYNSTILDLKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFEDIFALTFETCFPDR----FDESKIHYRQLCPDGSTQAVTRENKHEYFRLWMDFYLNRSIAPGFESFRNGFFHVIEGNSFRLFGSEE 716          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 76/247 (30.77%), Postives = 121/247 (48.99%), Query Frame = 1
Query:   31 RISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFD--KGALLFTTVGNESTFQPNP----NSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML---ENDISDVLDLTFSIDADEEKLILYERAQVTDY---ELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPG-ELISIFHDQE 732
            +I VRR  I  DS   ++      LK  L + F  E GIDAGGL +EW+ LL++ +F+   G  ++    + S F  +P     S  +   L  +   G V+G A+F+  +LD+ F ++ YK +    +++ D   + P+  +NL  ML   E++  DV  LTF         IL +     +Y   EL   GRN+ +T+ NKH++V    E  L  +I P  N F+ GF  +      I +F+ +E
Sbjct:  522 KIKVRRDVISHDSLRCIKEHQGDLLKS-LRIEFVNEPGIDAGGLRKEWFFLLTKSLFNPMNGLFIYIKESSRSWFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYVTVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEE 767          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 70/224 (31.25%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQ---DLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGF 684
            L + VRR +I++D+  +L M + +   DLK +L V F+GE+G+D GG+++E++QL+   IF+    +FT       F  NP+S ++TE    F  +G ++G A+++  +LDVHF    Y+ ++G K T+ D+    P  +++LK +L  E  + D + +TF I   +    L+    +  Y+L   G  I +T EN+ ++V   +++ L  ++     AF  GF
Sbjct:  534 LTLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDEATKLFWFNPSS-FETE--GQFTLIG-ILGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQISQTD----LFGNPMM--YDLKENGDKIPITNENRKEFVISYSDYILNKSVEKQFKAFRRGF 747          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 71/239 (29.71%), Postives = 123/239 (51.46%), Query Frame = 1
Query:   40 VRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGE-----EGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQ-TEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWM--LENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            +RR  I +D ++       + LKG + + F  E     EGID GGLT+E+   + + +FD    LF+         PN ++  Q  E L  ++F+G ++GK +++G  +D  F   F    LG    + D+ ++DP+ ++ L ++   + D+ + + L F++  +E     +    V D  LIP G NI VT EN+ QY+ LV+ + L   +     AF  GFT++I    +++FH+ E
Sbjct:  676 IRRNRIFDDGFDAF-YNFGKLLKGPIRITFVDEHGVVEEGIDGGGLTKEFLTSICKTVFDINYGLFSET-KAHLLYPNTHAYAQDVERLRCYEFLGMLIGKCIYEGIQIDAAFASFFVAKWLGHPSYFDDLTSLDPNLYEGLVFLKNYDGDVENDMALNFTVVHEE-----FGVRNVID--LIPNGSNISVTNENRLQYIHLVSNYYLNARLSRQCRAFTNGFTQIIDPHWLAMFHESE 905          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22
Identity = 66/238 (27.73%), Postives = 125/238 (52.52%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLE---NDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR  ++ D+  +L + S  DLK  L V F GEE +DAGG+T+E++ LL + + +    +FT   + +    +       EH ++F  +G   G A+++  ++D+HF  + YK +L VK    D++ + P   ++L+ +L+    D+ +   L F+I  +   +I  ++       LIPGG N+ V ++N+ ++VD    +    ++     AF  GF ++  G+++ +F   E
Sbjct:  702 LVLHVRRNNLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCF--VEH-NWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNFTICRESYGVIEQKK-------LIPGGDNVTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPSE 929          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UPL5_ARATH (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.998e-22
Identity = 72/225 (32.00%), Postives = 114/225 (50.67%), Query Frame = 1
Query:   40 VRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFD-KGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEN-----DISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELI 696
            + R+ +L +S+  +   S + L G L + F+ EE    G L REW+ L+ + IF+ K  L   +  +   F PNP S     H  +F+F GRV+  AL     + V F R F+  + G+K++  DI+  D   + + K +LE      D +  L LTF ++ +E    L +R  +   EL P G+   V  +N+ QYVDL+ E R  T I   +  F  GFT+++
Sbjct:  515 IDRSNLLSESFEYIVGASPEALHGGLFMEFKNEEATGPGVL-REWFYLVCQEIFNPKNTLFLRSADDFRRFSPNPASKVDPLHPDFFEFTGRVIALALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMDPEFFDSNAGLGLTFVLETEE----LGKRDTI---ELCPDGKLKAVNSKNRKQYVDLLIERRFATPILEQVKQFSRGFTDML 731          
The following BLAST results are available for this feature:
BLAST of EY665513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
UPL7_ARATH1.536e-2631.12E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis th... [more]
UBE3C_MOUSE1.536e-2632.11Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ub... [more]
UBE3A_HUMAN2.006e-2632.59Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UB... [more]
UBE3C_HUMAN2.620e-2632.11Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UB... [more]
HUL4_ASHGO9.956e-2632.52Probable E3 ubiquitin-protein ligase HUL4 OS=Ashby... [more]
HUL4_YEAST1.101e-2430.77Probable E3 ubiquitin-protein ligase HUL4 OS=Sacch... [more]
UBE3A_MOUSE6.040e-2331.25Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ub... [more]
YFK7_SCHPO7.889e-2329.71Probable E3 ubiquitin protein ligase C167.07c OS=S... [more]
HERC3_HUMAN1.757e-2227.73Probable E3 ubiquitin-protein ligase HERC3 OS=Homo... [more]
UPL5_ARATH2.998e-2232.00E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665513 ID=EY665513; Name=EY665513; organism=Citrus sinensis; type=EST; length=859bp
CATCAACATGATCACCACCACAGTCCTTTGAGAATATCTGTAAGAAGAGC
TTACATTCTTGAAGATTCATACAACCAACTGCGCATGCGATCAACGCAAG
ATTTGAAGGGAAGGTTGACTGTTCACTTTCAAGGAGAGGAAGGCATTGAT
GCCGGTGGCCTTACAAGGGAGTGGTACCAATTGCTGTCAAGGGTTATTTT
TGACAAGGGAGCCCTACTTTTCACAACAGTGGGCAATGAATCAACATTCC
AACCCAACCCCAACTCTGTTTACCAAACTGAACATCTTTCATATTTCAAG
TTTGTTGGGCGAGTTGTTGGAAAAGCTCTTTTTGATGGGCAACTGTTGGA
TGTCCATTTTACTCGATCTTTCTACAAGCACATCCTGGGGGTTAAAGTTA
CTTATCATGACATTGAAGCTATTGATCCGGATTACTTCAAAAACCTGAAG
TGGATGCTTGAGAATGACATCAGTGATGTTCTTGACCTCACTTTTAGTAT
TGATGCTGATGAGGAGAAGCTGATTTTGTATGAAAGGGCGCAGGTAACCG
ACTATGAGCTAATTCCTGGTGGACGGAATATTAAAGTTACTGAGGAGAAT
AAGCACCAGTATGTGGATTTAGTCGCGGAGCATCGTTTGACGACTGCTAT
TCGGCCTCCAATAAATGCTTTTCTGGAGGGATTTACCGAACTAATTCCTG
GGGAGTTGATATCTATCTTCCATGACCAGGAATTATAATTATTGATTAGT
GGGCTTTCCGGATATTGAATCTGGATGAAATGAGGGCAAATACCGGAATA
TTCTGGATATAGTGCTGGCTCTCCTGGTTATCCAAGTGTTTTGGGAGGTT
GGTCACGGG
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