EY665513

Overview
NameEY665513
Unique NameEY665513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.653e-21
Identity = 75/251 (29.88%), Postives = 118/251 (47.01%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILG--------------VKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR +++ DS ++L  R   DLK +L V F GE G+D GGLT+EW+ LL R IF     +FT          +  S ++ ++ S F+ VG ++G A+++   LD+ F    YK +L                 VT  D+  + P+    LK +L  E ++ +    TF +  +E  +I         Y L PGG  I VT +N+ +YV L  +  L  +I     AF  GF  +     + +   +E
Sbjct:  415 LNMKVRRTHLVSDSLDELT-RKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFT---YHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSYEGNVEEDFYSTFQVFQEEFGVI-------KSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEE 654          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.384e-21
Identity = 75/251 (29.88%), Postives = 117/251 (46.61%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILG--------------VKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR +++ DS ++L  R   DLK +L V F GE G+D GGLT+EW+ LL R IF     +FT          +  S ++ ++ S F+ VG ++G A+++   LD+ F    YK +L                 VT  D+  I P+    L  +L  E ++ +    TF +  +E  +I         Y L PGG  I VT +N+ +YV L  +  L  +I     AF  GF  +     + +   +E
Sbjct:  417 LNMKVRRTHLVSDSLDELT-RKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFT---YHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICSVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGII-------KSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEE 656          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.384e-21
Identity = 75/251 (29.88%), Postives = 117/251 (46.61%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILG--------------VKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR +++ DS ++L  R   DLK +L V F GE G+D GGLT+EW+ LL R IF     +FT          +  S ++ ++ S F+ VG ++G A+++   LD+ F    YK +L                 VT  D+  I P+    L  +L  E ++ +    TF +  +E  +I         Y L PGG  I VT +N+ +YV L  +  L  +I     AF  GF  +     + +   +E
Sbjct:  417 LNMKVRRTHLVSDSLDELT-RKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFT---YHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGII-------KSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEE 656          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19
Identity = 76/241 (31.54%), Postives = 114/241 (47.30%), Query Frame = 1
Query:   40 VRRAYILEDSYNQLRM---RSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIF-DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHIL----GVKVTYHDIEAIDPDYFKNLKWMLENDISDV--LDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + R  +LED++N       R    L       F  E GID GG+T+E+   +S   F D    LF T      ++  P+ VY    L Y  F+G+VVGK L++  L+DV F   F K +L    G   ++ D+ + D   + NL  +L     ++  LDLTF ID  E        A+V D  LIP G    VT++N   YV  V +++L      P++AF  G + +I    + +F+  E
Sbjct:  558 ISRDNVLEDAFNAFNSIGERFKASLDVTFINEFGEEAGIDGGGITKEFLTTVSDEGFKDPKHELFRT---NDRYELYPSVVYDATKLKYIWFLGKVVGKCLYEHVLIDVSFADFFLKKLLNYSNGFLSSFSDLGSYDSVLYNNLIKLLNMTTDEIKSLDLTFEIDEPESS------AKVVD--LIPNGSKTYVTKDNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIE 787          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18
Identity = 63/238 (26.47%), Postives = 114/238 (47.90%), Query Frame = 1
Query:   34 ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIF--DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEND---ISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            ++VRR +++ED  NQL     +DL+  L V F GE G D GG+ +E++  L   +   + G  ++    +   F   P    + E   YF F G + G +LF+  + ++ F  + +K +L    +  D++ + PD  KNL+ +L+++     +V  + F++  D             D  LIP G +I V + NK  YV     +    +++     F  GF ++   ++I +FH +E
Sbjct:  683 LTVRRNHLIEDVLNQLSQFENEDLRKELWVSFSGEIGYDLGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKP----KFEKKRYF-FFGVLCGLSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHFNVHWDR-----------NDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPEE 904          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18
Identity = 61/238 (25.63%), Postives = 119/238 (50.00%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML---ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR  I+ D+   LR     D K  L V F GE+ +DAGG+ +E++ L+ R + D    +F    +      +  +    E    F  +G + G A+++  ++D+HF  + YK +L  K +  D++ + PD  ++++ +L   E+DI +   L F+I  +      +   +V   EL+  G +  V ++N+ ++VD   ++    ++    +AF  GF ++  G+++ +F   E
Sbjct:  709 LILVVRRENIVGDAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTF---EDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVEN-----FGATEVK--ELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNE 936          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18
Identity = 61/238 (25.63%), Postives = 119/238 (50.00%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML---ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR  I+ D+   LR     D K  L V F GE+ +DAGG+ +E++ L+ R + D    +F    +      +  +    E    F  +G + G A+++  ++D+HF  + YK +L  K +  D++ + PD  ++++ +L   E+DI +   L F+I  +      +   +V   EL+  G +  V ++N+ ++VD   ++    ++    +AF  GF ++  G+++ +F   E
Sbjct:  709 LILVVRRENIVGDAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTF---EDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVEN-----FGATEVK--ELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNE 936          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17
Identity = 60/238 (25.21%), Postives = 117/238 (49.16%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML---ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            L + VRR  I+ D+   LR     D K  L V F GE+ +DAGG+ +E++ L+ R + D    +F    +      +  +    E    F  +G + G A+++  ++D+HF  + YK +L  K +  D++ + P   ++++ +L   E+DI +   L F+I  +      +   +V   EL+  G +  V  +N+ ++VD   ++    ++    +AF  GF ++  G+++ +F   E
Sbjct:  709 LILVVRRENIVGDAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTF---EDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNFTITVEN-----FGATEVK--ELVLNGADTAVNRQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNE 936          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBR5_MOUSE (E3 ubiquitin-protein ligase UBR5 OS=Mus musculus GN=Ubr5 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16
Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 1
Query:  202 DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML-------ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIP 699
            D  A LF   G    + P P    +   L+ F+ +GR++G  L   +L  +   R   K +LG KV +HD    DP  +++L+ ++        + +   +DL F+ID  +E+       QV   ELIP G NI VT +N ++YV   AEHR+      P++A  +G  +++P
Sbjct: 2492 DDNAPLFYQPGKRGFYTPRPGKNTEAR-LNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLILASQSSDADAVFSAMDLAFAIDLCKEE----GGGQV---ELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLP 2656          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBR5_HUMAN (E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16
Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 1
Query:  202 DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML-------ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIP 699
            D  A LF   G    + P P    +   L+ F+ +GR++G  L   +L  +   R   K +LG KV +HD    DP  +++L+ ++        + +   +DL F+ID  +E+       QV   ELIP G NI VT +N ++YV   AEHR+      P++A  +G  +++P
Sbjct: 2499 DDNAPLFYQPGKRGFYTPRPGKNTEAR-LNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLILASQSSDADAVFSAMDLAFAIDLCKEE----GGGQV---ELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLP 2663          
The following BLAST results are available for this feature:
BLAST of EY665513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
HECD2_MOUSE5.653e-2129.88Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus... [more]
HECD2_PONAB7.384e-2129.88Probable E3 ubiquitin-protein ligase HECTD2 OS=Pon... [more]
HECD2_HUMAN7.384e-2129.88Probable E3 ubiquitin-protein ligase HECTD2 OS=Hom... [more]
HUL5_YEAST5.291e-1931.54Probable E3 ubiquitin-protein ligase HUL5 OS=Sacch... [more]
HERC5_HUMAN1.179e-1826.47Probable E3 ubiquitin-protein ligase HERC5 OS=Homo... [more]
HERC4_HUMAN3.430e-1825.63Probable E3 ubiquitin-protein ligase HERC4 OS=Homo... [more]
HERC4_RAT4.479e-1825.63Probable E3 ubiquitin-protein ligase HERC4 OS=Ratt... [more]
HERC4_MOUSE4.953e-1725.21Probable E3 ubiquitin-protein ligase HERC4 OS=Mus ... [more]
UBR5_MOUSE7.152e-1630.64E3 ubiquitin-protein ligase UBR5 OS=Mus musculus G... [more]
UBR5_HUMAN7.152e-1630.64E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665513 ID=EY665513; Name=EY665513; organism=Citrus sinensis; type=EST; length=859bp
CATCAACATGATCACCACCACAGTCCTTTGAGAATATCTGTAAGAAGAGC
TTACATTCTTGAAGATTCATACAACCAACTGCGCATGCGATCAACGCAAG
ATTTGAAGGGAAGGTTGACTGTTCACTTTCAAGGAGAGGAAGGCATTGAT
GCCGGTGGCCTTACAAGGGAGTGGTACCAATTGCTGTCAAGGGTTATTTT
TGACAAGGGAGCCCTACTTTTCACAACAGTGGGCAATGAATCAACATTCC
AACCCAACCCCAACTCTGTTTACCAAACTGAACATCTTTCATATTTCAAG
TTTGTTGGGCGAGTTGTTGGAAAAGCTCTTTTTGATGGGCAACTGTTGGA
TGTCCATTTTACTCGATCTTTCTACAAGCACATCCTGGGGGTTAAAGTTA
CTTATCATGACATTGAAGCTATTGATCCGGATTACTTCAAAAACCTGAAG
TGGATGCTTGAGAATGACATCAGTGATGTTCTTGACCTCACTTTTAGTAT
TGATGCTGATGAGGAGAAGCTGATTTTGTATGAAAGGGCGCAGGTAACCG
ACTATGAGCTAATTCCTGGTGGACGGAATATTAAAGTTACTGAGGAGAAT
AAGCACCAGTATGTGGATTTAGTCGCGGAGCATCGTTTGACGACTGCTAT
TCGGCCTCCAATAAATGCTTTTCTGGAGGGATTTACCGAACTAATTCCTG
GGGAGTTGATATCTATCTTCCATGACCAGGAATTATAATTATTGATTAGT
GGGCTTTCCGGATATTGAATCTGGATGAAATGAGGGCAAATACCGGAATA
TTCTGGATATAGTGCTGGCTCTCCTGGTTATCCAAGTGTTTTGGGAGGTT
GGTCACGGG
back to top