EY665513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UBR5_RAT (E3 ubiquitin-protein ligase UBR5 (Fragment) OS=Rattus norvegicus GN=Ubr5 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16 Identity = 52/173 (30.06%), Postives = 86/173 (49.71%), Query Frame = 1 Query: 202 DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML-------ENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIP 699 D A LF G + P P + L+ F+ +GR++G L +L + R K +LG KV +HD DP +++L+ ++ + + +DL F++D +E+ QV ELIP G NI VT +N ++YV AEHR+ P++A +G +++P Sbjct: 620 DDNAPLFYQPGKRGFYTPRPGKNTEAR-LNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLILASQSSDADAVFSAMDLAFAVDLCKEE----GGGQV---ELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLP 784
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.549e-15 Identity = 61/238 (25.63%), Postives = 113/238 (47.48%), Query Frame = 1 Query: 34 ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIF--DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEN---DISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732 + VRR+ +++D+ QL D L V F E ++GG++ E++ + + + G ++ +G+ F P + E YF F G + G +LF+ + ++ F + YK +L K + D++ + P K+L+ +L++ DI D L + FSI D+ D +LIP G +I V + NK YV ++ +++ F GF + E++ F+ +E Sbjct: 674 LRVRRSRLVKDALRQLSQAEATDFCKVLVVEFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKP----KPEKKRYFLF-GMLCGLSLFNLNVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIHWDQN-----------DVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEE 895
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13 Identity = 69/260 (26.54%), Postives = 113/260 (43.46%), Query Frame = 1 Query: 46 RAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAG-GLTREWYQLLSRV---------------IFDKGALLFTTVGNESTFQPNPNSVYQT--EHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNL---------KWMLENDISD----VLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732 R ILE + + + Q ++ + + E + G G T E+Y L+SR I K + + S P P S T + L F +G VV KAL DG++LD+ +++FYK ILG +++ DI +DP+ K L K + D DL+F E+ + + TDY+L P N V +N +Y+ + + I+ + AF GF ++ E + IF+++E Sbjct: 1119 RENILESAAKMMELYGNQ----KVVIEVEYSEEVGTGLGPTLEFYTLVSRAFQNPDLGMWRNDCSFIVGKPVEHSGVLASSSGLFPRPWSGTSTTSDVLQKFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDPELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEE 1374
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HYD_DROME (E3 ubiquitin-protein ligase hyd OS=Drosophila melanogaster GN=hyd PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13 Identity = 47/173 (27.17%), Postives = 84/173 (48.55%), Query Frame = 1 Query: 202 DKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEN-------DISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIP 699 D LF + G + P E ++ F+ +GR++G L +LL + R K+ILG K+ +HD+ DP +++ + +++N + + ++L F ID L + + ELIPGGR++ VT N +YV E+RL + + A +G +++P Sbjct: 2585 DDNEPLFYSPGKRGFYTPRQGFA-SFERINAFRNIGRLIGLCLLQNELLPLFLQRHVLKYILGRKIKFHDLAFFDPALYESFRQIIQNAQTKEGEETINRMELCFVID-------LMKEEGCGNRELIPGGRDVAVTSSNIFEYVRRYTEYRLIKSQEKALEALKDGVFDVLP 2749
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.927e-11 Identity = 65/212 (30.66%), Postives = 101/212 (47.64%), Query Frame = 1 Query: 121 VHFQGEEGIDAGGL----TREWYQLLSRVIFDKGALLFTT------VG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTF--SIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISI 717 V GE DAGG+ E Q L I D LL + VG N F NP++ EHL FKF+G ++G A+ + LD+H +K + V +T D+E +D Y + L +L + S + + +F I D + + A +IPGG +I +T N+ +YV+ E+RL R + A EG + ++P L+S+ Sbjct: 4514 VKLVGEGADDAGGVFDDTITEMCQELETGIVD---LLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGITEESFHEMIPLDS---FVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIEYRLHEMDR-QVAAVREGMSWIVPVPLLSL 4717 The following BLAST results are available for this feature:
BLAST of EY665513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665513 ID=EY665513; Name=EY665513; organism=Citrus sinensis; type=EST; length=859bpback to top |