EY665509

Overview
NameEY665509
Unique NameEY665509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.019e-43
Identity = 77/115 (66.96%), Postives = 94/115 (81.74%), Query Frame = 3
Query:  165 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            Q   ++   F DV GVDEAK +  E+V +L+ P+RFT +G ++PKGVLLVGPPGTGKT+LA+AIAGEAGVPFFS SGSEF EMFVGVGA RVRDLF  AK+ +PCI+F+DEIDA+
Sbjct:  217 QPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAI 331          

HSP 2 Score: 35.4242 bits (80), Expect = 1.019e-43
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  565 LXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            L   L E+DGF+ N GIIV+AATN  + L+ A
Sbjct:  347 LNQMLVELDGFKQNEGIIVVAATNFPESLDKA 378          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.795e-43
Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 3
Query:  147 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRLLMMGQD 710
            +S+AK  +E    VTF DVAG++E K++  E++E+LK P +F  +G R PKGVLL G PG GKTLLAKAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEIDAV            +DEREQTL QL      F             +    +  L+RPGR DR++ +   D
Sbjct:  139 KSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPD 327          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 98/178 (55.06%), Postives = 127/178 (71.35%), Query Frame = 3
Query:  171 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLXQLF-DRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRLLM 698
            +PN  V F+D+AG +EAK++ +E+V+FLK PER+  +GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+            NDEREQTL QL  + +G+              +    +  LMRPGR DR++L+
Sbjct:  164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLV 339          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 98/178 (55.06%), Postives = 127/178 (71.35%), Query Frame = 3
Query:  171 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLXQLF-DRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRLLM 698
            +PN  V F+D+AG +EAK++ +E+V+FLK PER+  +GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+            NDEREQTL QL  + +G+              +    +  LMRPGR DR++L+
Sbjct:  164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLV 339          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.830e-43
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 3
Query:  192 FDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            F DV GVDEAK +  E+V +L+ P+RFT +G ++PKGVLLVGPPGTGKT+LA+A+AGEAGVPFFS SGSEF EMFVGVGA RVRDLF  AK+ +PCI+F+DEIDA+
Sbjct:  222 FSDVKGVDEAKAELEEIVHYLRDPKRFTHLGGKLPKGVLLVGPPGTGKTMLARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAI 327          

HSP 2 Score: 35.039 bits (79), Expect = 3.830e-43
Identity = 18/32 (56.25%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  565 LXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            L   L E+DGF+ N GIIVIAATN    L+ A
Sbjct:  343 LNQLLVELDGFKQNEGIIVIAATNFPQSLDKA 374          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.000e-43
Identity = 97/184 (52.72%), Postives = 122/184 (66.30%), Query Frame = 3
Query:  147 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRL 692
            +S+AK F  E +  + F DVAGVDEAK++ ME V+FLK P+ +  +GA+IP+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEF+EMFVGVG SRVRDLF  A++NAPCI+F+DEIDA+            NDERE TL QL      F             +    +  L+RPGR DR++
Sbjct:  279 KSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQI 462          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.823e-43
Identity = 96/179 (53.63%), Postives = 126/179 (70.39%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLXQLF-DRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRLLMMGQDSK 716
            V F+D+AG +EAK++ +E+V+FLK P+R+ ++GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF  AK+ AP I+F+DEIDA+            NDEREQTL QL  + +G+              +    +  L+RPGR DR++L+   D K
Sbjct:  173 VRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFK 351          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.911e-43
Identity = 101/196 (51.53%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  147 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX--NDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHS-----ESCLMRPGRLDRRLLMMGQD 710
            +S+AK F  E +  ++F +VAG DEAKQ+ ME V FLK P ++T +GA+IP+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEFVEMFVGVGASRVRDLF +A+  AP I+F+DEIDA+             NDERE TL QL      F        D      G +     ++ LMRPGR DR + +   D
Sbjct:  271 KSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGF-----TTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPD 461          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.164e-42
Identity = 94/177 (53.11%), Postives = 117/177 (66.10%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRLLMMGQDSK 716
            + F DVAG DEAKQ+ ME V FLK P+++  +GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR LF++A++ AP I+F+DEIDA+           NDERE TL QL      F             +    +  L+RPGR DR++ +   D K
Sbjct:  319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 495          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.186e-42
Identity = 72/111 (64.86%), Postives = 91/111 (81.98%), Query Frame = 3
Query:  177 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            NT V+F DV G DE K++ ++VVEFL+ PE+F  IGA++PKGVLLVGPPG GKTLLAKA++GEA VPF   SGS F E+ VG+GASR+R LF  AK+N+PC+VF+DEID+V
Sbjct:  160 NTDVSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSV 270          

HSP 2 Score: 38.5058 bits (88), Expect = 3.186e-42
Identity = 16/35 (45.71%), Postives = 25/35 (71.43%), Query Frame = 1
Query:  556 SRPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            ++ +   L EMDGF+   GIIV+ ATN+A++L+ A
Sbjct:  284 NQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKA 318          
The following BLAST results are available for this feature:
BLAST of EY665509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 365
Match NameE-valueIdentityDescription
FTSH4_ARATH1.019e-4366.96Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH_AQUAE1.795e-4351.32Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_HELPY3.063e-4355.06Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELPJ3.063e-4355.06Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH4_ORYSJ3.830e-4370.75Cell division protease ftsH homolog 4, mitochondri... [more]
RCA1_SCHPO4.000e-4352.72Mitochondrial respiratory chain complexes assembly... [more]
FTSH_HELFE6.823e-4353.63Cell division protease ftsH homolog OS=Helicobacte... [more]
AFG3_YEAST8.911e-4351.53Mitochondrial respiratory chain complexes assembly... [more]
FTSH3_ARATH1.164e-4253.11Cell division protease ftsH homolog 3, mitochondri... [more]
YME1_SCHMA3.186e-4264.86Protein YME1 homolog OS=Schistosoma mansoni PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665509 ID=EY665509; Name=EY665509; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGGGATCATTGTTGTTTAACTTGATTGGGAATCTGGCTTTC
CCACTTATCTTAATTGGAGGGCTGTTCCTTCTCTCAAGGCGTTCATCTGG
TGGAATGGGCGGTCCTGGTGGGCCTGGTTTCCCCCTTGCCTTTGGTCAGT
CCAAAGCTAAATTCCAGATGGAACCAAATACTGGTGTGACATTTGATGAT
GTTGCCGGAGTTGATGAGGCAAAACAAGATTTCATGGAAGTGGTGGAGTT
CCTTAAGAAGCCCGAGAGATTTACAGCTATTGGAGCTCGTATTCCAAAGG
GTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAGACTCTTCTTGCCAAG
GCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTCCATATCAGGTTCTGA
GTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTAGAGTCCGAGATCTTT
TCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTATTTGTGGATGAAATT
GATGCCGTTGGAAGACAAAGAGGAACTGGAATTGGAGGAGGGAATGATGA
AAGAGAGCAGACCCTTANCCAACTTTTTGACAGAAATGGATGGTTTTGAG
GGTAATACTGGAATCATTGTGATTGCTGCAACTAACAGGGCGGACATTCT
GAATCCTGCCTAATGAGGCCTGGACGTTTGGATAGAAGGTTACTGATGAT
GGGCCAAGATTCCAAGAAGAAGTGAAATATAGAAGGTTCGGGGACCACCG
AAACCTGAGGCGAGGTGGTCGCTAGGGGACGGGCCATTGAAGAGGCGGGT
TGTCGGGTGGGGGCTGGAAAGCCCGACAATGAGGTGCCTAACCAACGGAA
AACGGGA
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