EY665509

Overview
NameEY665509
Unique NameEY665509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.433e-34
Identity = 81/167 (48.50%), Postives = 104/167 (62.28%), Query Frame = 3
Query:  210 VDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDRRLLMMGQD 710
            +DEAK +  E+V++LK PE+++ +G R+PKGVLLVGPPGTGKTLLA+AIAGEA VPFF  +GSEF E+ VG GA RVRDLF KAK  APCI+F+DEID+V           +    QT+ QL      F             +    +  L+RPGR D R+ +   D
Sbjct:  206 MDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPD 370          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.422e-32
Identity = 62/139 (44.60%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  162 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQL 575
            F++E    V+++D+ G+D   ++  E VE  L KPE F  +G   PKGVLL GPPGTGKTLLAKA+A +    F  + GSEFV+ ++G GA  VR++F+ AKE AP I+F+DE+DA+           + E ++T+ QL
Sbjct:  130 FEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQL 268          

HSP 2 Score: 36.965 bits (84), Expect = 1.422e-32
Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R +   L E+DGF+    + VI ATNR DIL+PA
Sbjct:  263 RTMMQLLAELDGFDPRGDVKVIGATNRIDILDPA 296          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.105e-32
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            V ++D+ G++E KQ+  E VE+ LK  E F  IG R PKGVLL GPPGTGKTLLAKA+A E+G  F S+ G E    +VG     +R++F+KA+++APCI+F DEIDA+
Sbjct:  449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAI 557          

HSP 2 Score: 38.5058 bits (88), Expect = 3.105e-32
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  577 LTEMDGFEGNTGIIVIAATNRADILNPA 660
            LTE+DG E    ++VIAATNR DI++PA
Sbjct:  578 LTELDGMEEPKDVVVIAATNRPDIIDPA 605          

HSP 3 Score: 115.931 bits (289), Expect = 2.971e-29
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            VT++D+ G+ E  +   E++E  ++ PE F  +G   PKGVLLVGPPGTGKTLLAKA+A EAG  F+ I+G E +  +VG     +R +F++A+ENAP I+F+DEIDA+
Sbjct:  176 VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAI 284          

HSP 4 Score: 34.2686 bits (77), Expect = 2.971e-29
Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R +   LT MDG +G   ++VI ATNR + L+PA
Sbjct:  298 RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPA 331          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.633e-30
Identity = 54/109 (49.54%), Postives = 80/109 (73.39%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            V+++D+  ++EAKQ   E+VE+ ++ PE F  +G   PKG+LL GPPGTGKTLLA+A+A E G  F +++G E +  F G    R+R++FK+A+ENAP I+F+DEIDA+
Sbjct:  209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAI 317          

HSP 2 Score: 36.1946 bits (82), Expect = 1.633e-30
Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R +   LT MDG +G   +IVI ATNR D ++PA
Sbjct:  331 RVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPA 364          

HSP 3 Score: 110.538 bits (275), Expect = 4.163e-28
Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            V ++D+ G+D  KQ   E VE+ L+ PE FT  G   PKG+LL GPPGTGKT+LAKA+A E+G  F ++ G E +  +VG     +R++F+KA++ AP ++F DEID++
Sbjct:  484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSI 592          

HSP 4 Score: 35.8094 bits (81), Expect = 4.163e-28
Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R +   L EMDG      +++IAATNR DIL+PA
Sbjct:  607 RIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPA 640          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.634e-30
Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            V ++D+ G++ AKQ+ ME VE+ LK PE F A   + P+G+LL GPPGTGKTLLAKA+A E+   F S+ G E +  +VG     VR++F+KA++ APC++F DEID++
Sbjct:  452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSL 560          

HSP 2 Score: 38.1206 bits (87), Expect = 1.634e-30
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R +   LTE+DG E    ++VIAATNR D+++PA
Sbjct:  575 RVVSQLLTELDGLEELKDVVVIAATNRPDMIDPA 608          

HSP 3 Score: 110.538 bits (275), Expect = 5.425e-28
Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 3
Query:  186 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 509
            VT++D+ G+    +   E++E  LK PE F  +G   PKGVLL GPPGTGKTL+AKA+A E    F  ISG E +  + G    R+R++F++AKENAP I+F+DEID++
Sbjct:  179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSI 287          

HSP 4 Score: 35.4242 bits (80), Expect = 5.425e-28
Identity = 17/34 (50.00%), Postives = 21/34 (61.76%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R +   L  MDG E    +IVIAATNR D ++PA
Sbjct:  301 RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPA 334          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 75/175 (42.86%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  165 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDR 686
            ++E    ++F+D+ G++   +D  EVVE  LK PE F  +G   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QL      F             +    +  ++RPGR DR
Sbjct:  138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDR 312          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 75/175 (42.86%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  165 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDR 686
            ++E    ++F+D+ G++   +D  EVVE  LK PE F  +G   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QL      F             +    +  ++RPGR DR
Sbjct:  138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDR 312          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 75/175 (42.86%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  165 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDR 686
            ++E    ++F+D+ G++   +D  EVVE  LK PE F  +G   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QL      F             +    +  ++RPGR DR
Sbjct:  138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDR 312          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 75/175 (42.86%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  165 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQLFDRNGWF*G*YWNHCDCCN*QGGHSESCLMRPGRLDR 686
            ++E    ++F+D+ G++   +D  EVVE  LK PE F  +G   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QL      F             +    +  ++RPGR DR
Sbjct:  138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDR 312          
BLAST of EY665509 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.635e-30
Identity = 64/129 (49.61%), Postives = 81/129 (62.79%), Query Frame = 3
Query:  192 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLXQL 575
            + D+ G+ E   +  E VE  LK+PE FT IG   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ ++G GA  VR+LF  AK+ AP I+F+DEIDAV           + E ++TL QL
Sbjct:  177 YTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQL 305          

HSP 2 Score: 33.8834 bits (76), Expect = 3.635e-30
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = 1
Query:  559 RPLXNFLTEMDGFEGNTGIIVIAATNRADILNPA 660
            R L   L  MDGFE    + +I ATNR DIL+ A
Sbjct:  300 RTLMQLLAGMDGFETRGDVKIIGATNRIDILDKA 333          
The following BLAST results are available for this feature:
BLAST of EY665509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 365
Match NameE-valueIdentityDescription
YME1_CAEEL4.433e-3448.50Protein YME1 homolog OS=Caenorhabditis elegans GN=... [more]
PSMR_ARCFU1.422e-3244.60Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
Y1156_METJA3.105e-3253.21Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
SAV_SULAC1.633e-3049.54Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
Y1297_ARCFU1.634e-3049.54Cell division cycle protein 48 homolog AF_1297 OS=... [more]
PSMR_METMP2.973e-3042.86Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM72.973e-3042.86Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM62.973e-3042.86Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM52.973e-3042.86Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METB63.635e-3049.61Proteasome-activating nucleotidase OS=Methanoregul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665509 ID=EY665509; Name=EY665509; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGGGATCATTGTTGTTTAACTTGATTGGGAATCTGGCTTTC
CCACTTATCTTAATTGGAGGGCTGTTCCTTCTCTCAAGGCGTTCATCTGG
TGGAATGGGCGGTCCTGGTGGGCCTGGTTTCCCCCTTGCCTTTGGTCAGT
CCAAAGCTAAATTCCAGATGGAACCAAATACTGGTGTGACATTTGATGAT
GTTGCCGGAGTTGATGAGGCAAAACAAGATTTCATGGAAGTGGTGGAGTT
CCTTAAGAAGCCCGAGAGATTTACAGCTATTGGAGCTCGTATTCCAAAGG
GTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAGACTCTTCTTGCCAAG
GCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTCCATATCAGGTTCTGA
GTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTAGAGTCCGAGATCTTT
TCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTATTTGTGGATGAAATT
GATGCCGTTGGAAGACAAAGAGGAACTGGAATTGGAGGAGGGAATGATGA
AAGAGAGCAGACCCTTANCCAACTTTTTGACAGAAATGGATGGTTTTGAG
GGTAATACTGGAATCATTGTGATTGCTGCAACTAACAGGGCGGACATTCT
GAATCCTGCCTAATGAGGCCTGGACGTTTGGATAGAAGGTTACTGATGAT
GGGCCAAGATTCCAAGAAGAAGTGAAATATAGAAGGTTCGGGGACCACCG
AAACCTGAGGCGAGGTGGTCGCTAGGGGACGGGCCATTGAAGAGGCGGGT
TGTCGGGTGGGGGCTGGAAAGCCCGACAATGAGGTGCCTAACCAACGGAA
AACGGGA
back to top