CX674313

Overview
NameCX674313
Unique NameCX674313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_DICNV (Protein recA OS=Dichelobacter nodosus (strain VCS1703A) GN=recA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.000e-38
Identity = 76/126 (60.32%), Postives = 91/126 (72.22%), Query Frame = 3
Query:  438 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            AL   L Q+   FGKG++M LG  V    +  +STGS  LDIALG GGLPKGR+VEIYGPE+SGKTT+ LHVIAEAQ+ GG   FIDAEHALDP  A  +GV T++L + QPD GEQAL + D L+
Sbjct:    8 ALTAVLTQLDKQFGKGTVMRLGEQVAAHDIQAISTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMMLHVIAEAQKNGGTAAFIDAEHALDPIYARKLGVNTDDLYVTQPDTGEQALEICDALV 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_BACWK (Protein recA OS=Bacillus weihenstephanensis (strain KBAB4) GN=recA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.000e-38
Identity = 77/132 (58.33%), Postives = 95/132 (71.97%), Query Frame = 3
Query:  420 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            MS +  AL  AL QI   FGKGSIM LG     R +  +S+GS ALD+ALG GG P+GRV+EIYGPE+SGKTT++LH IAE QRQGG   FIDAEHA+DP  A+ +GV  + LLL+QPD GEQ L + + L+
Sbjct:    1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RRISTISSGSLALDVALGVGGYPRGRVIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_BACC3 (Protein recA OS=Bacillus cereus (strain 03BB102) GN=recA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.000e-38
Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 3
Query:  420 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            MS +  AL  AL QI   FGKGSIM LG     R V  VS+GS ALD+ALG GG P+GR++EIYGPE+SGKTT++LH IAE QRQGG   FIDAEHA+DP  A+ +GV  + LLL+QPD GEQ L + + L+
Sbjct:    1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RKVSTVSSGSLALDVALGVGGYPRGRIIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_BACC1 (Protein recA OS=Bacillus cereus (strain ATCC 10987) GN=recA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.000e-38
Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 3
Query:  420 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            MS +  AL  AL QI   FGKGSIM LG     R V  VS+GS ALD+ALG GG P+GR++EIYGPE+SGKTT++LH IAE QRQGG   FIDAEHA+DP  A+ +GV  + LLL+QPD GEQ L + + L+
Sbjct:    1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RKVSTVSSGSLALDVALGVGGYPRGRIIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_BACAN (Protein recA OS=Bacillus anthracis GN=recA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.000e-38
Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 3
Query:  420 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            MS +  AL  AL QI   FGKGSIM LG     R V  VS+GS ALD+ALG GG P+GR++EIYGPE+SGKTT++LH IAE QRQGG   FIDAEHA+DP  A+ +GV  + LLL+QPD GEQ L + + L+
Sbjct:    1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RKVSTVSSGSLALDVALGVGGYPRGRIIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_BACAH (Protein recA OS=Bacillus thuringiensis (strain Al Hakam) GN=recA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.000e-38
Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 3
Query:  420 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            MS +  AL  AL QI   FGKGSIM LG     R V  VS+GS ALD+ALG GG P+GR++EIYGPE+SGKTT++LH IAE QRQGG   FIDAEHA+DP  A+ +GV  + LLL+QPD GEQ L + + L+
Sbjct:    1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RKVSTVSSGSLALDVALGVGGYPRGRIIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_WIGBR (Protein recA OS=Wigglesworthia glossinidia brevipalpis GN=recA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.045e-37
Identity = 83/133 (62.41%), Postives = 100/133 (75.19%), Query Frame = 3
Query:  414 ENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTL 812
            EN  KK  AL++ALD+I   FGKGSIM LG + +   +  +STGS +LDIALGTGGLP GR+VEIYGPE+SGKTTL L VI EAQ++G  C FIDAEHALDP  A+ +GV   NLL +QPD GEQAL + D+L
Sbjct:    4 ENNKKK--ALEKALDKIEKQFGKGSIMTLGENRS-MDIETISTGSLSLDIALGTGGLPMGRIVEIYGPESSGKTTLTLEVIYEAQKKGKICAFIDAEHALDPIYAKNLGVDINNLLCSQPDNGEQALEICDSL 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RICTY (Protein recA OS=Rickettsia typhi GN=recA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.045e-37
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K+ A+  AL QI  S+GKGS+M LG+      +  +STGS  LDIALG GG+PKGR++EI+GPE+SGKTTL LH+IAE+Q+ GG C FIDAEHALDP+ A+ +GV  + L+++QPD GEQAL + DTLI
Sbjct:    6 KERAIAAALAQIEKSYGKGSVMKLGQRPNI-DIEAISTGSLGLDIALGIGGVPKGRIIEIFGPESSGKTTLTLHLIAESQKNGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDTGEQALEIADTLI 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RALEJ (Protein recA OS=Ralstonia eutropha (strain JMP134) GN=recA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.045e-37
Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 3
Query:  423 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            ++K  AL  AL QI   FGKGSIM +G     + + VVSTGS  LDIALG GGLP+GRVVEIYGPE+SGKTTL L V+AE Q+ GG C FIDAEHALD + A  +GV    LL++QPD GEQAL + D L+
Sbjct:   12 AEKQKALAAALSQIEKQFGKGSIMRMGDGEVEKDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVNYASKLGVDVGELLISQPDTGEQALEITDALV 142          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_NITEU (Protein recA OS=Nitrosomonas europaea GN=recA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.045e-37
Identity = 79/129 (61.24%), Postives = 94/129 (72.87%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K+ AL  AL QI   +GKGSIM LG S   + + VVSTGS  LDIALG GGLP+GR++EIYGPE+SGKTTL L  IAE Q+ GG   FIDAEHALDP  A+ IGV  + LL++QPD GEQAL + D L+
Sbjct:    5 KNKALSAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLTLQAIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQALEITDMLV 133          
The following BLAST results are available for this feature:
BLAST of CX674313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RECA_DICNV8.000e-3860.32Protein recA OS=Dichelobacter nodosus (strain VCS1... [more]
RECA_BACWK8.000e-3858.33Protein recA OS=Bacillus weihenstephanensis (strai... [more]
RECA_BACC38.000e-3859.09Protein recA OS=Bacillus cereus (strain 03BB102) G... [more]
RECA_BACC18.000e-3859.09Protein recA OS=Bacillus cereus (strain ATCC 10987... [more]
RECA_BACAN8.000e-3859.09Protein recA OS=Bacillus anthracis GN=recA PE=3 SV... [more]
RECA_BACAH8.000e-3859.09Protein recA OS=Bacillus thuringiensis (strain Al ... [more]
RECA_WIGBR1.045e-3762.41Protein recA OS=Wigglesworthia glossinidia brevipa... [more]
RECA_RICTY1.045e-3758.91Protein recA OS=Rickettsia typhi GN=recA PE=3 SV=1[more]
RECA_RALEJ1.045e-3760.31Protein recA OS=Ralstonia eutropha (strain JMP134)... [more]
RECA_NITEU1.045e-3761.24Protein recA OS=Nitrosomonas europaea GN=recA PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5F09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5F09-K17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674313 ID=CX674313; Name=CX674313; organism=Citrus sinensis; type=EST; length=816bp
GTCACATACAGTGTTTCTGTGTGGGAGTGGGGCACTTGAACCAGAGAAAA
TATTAAAATAGTTTCAGTAAAAAGGGACGGAACCCAAAAGTCCAAAACCC
CCAAAACCCTAAGAACATAAACAATAAACACACCACACGTTCAATACTTT
GGTATTAAATGGAATAAATTGTAGTTGTTCACCATTAATTTTTTTGTTGC
CATTTATTTTTGGTTAGTTTTGGTTTGTGAGTCTCCATGGCGAGGCTCCT
TCGAAACGCTTCTTTACTTAGACGCTGTCTTCTCTCAGTCTCACCACCAC
ACCCACATCCACAGAGCTTTAGGGGAGGGATGTTGGAAACTTCTACTCAG
ATTTGCAACTTTTCTTCCAAAAGTAAAAGAAAGTCTAAGTCTGATGGGAG
TGACTCTGGTGAAGAGAATATGTCCAAGAAAGATCTAGCCCTACAACAAG
CATTGGATCAGATTACTAGCTCATTTGGGAAAGGGTCTATTATGTGGCTT
GGTCGGTCTGTCACTCCCAGACATGTTCCCGTTGTGTCCACAGGTTCTTT
TGCACTTGATATAGCACTAGGAACTGGTGGACTTCCAAAGGGACGTGTTG
TTGAGATATATGGTCCTGAGGCTTCTGGGAAAACAACTCTTGCTCTACAT
GTAATTGCTGAAGCACAAAGACAAGGAGGTTACTGTGTTTTTATCGATGC
TGAGCATGCTCTTGATCCATCTCTAGCTGAGACTATTGGAGTAAAGACAG
AGAATTTGCTTCTTGCACAACCTGATTGTGGTGAACAGGCTCTCAGTCTT
GTGGATACGCTGATCC
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