CX674313

Overview
NameCX674313
Unique NameCX674313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RHOS4 (Protein recA OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=recA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 80/129 (62.02%), Postives = 97/129 (75.19%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K  AL+ AL QI   FGKGSIM LG +     +   STGS  LDIALG GGLPKGR++EIYGPE+SGKTTL LHV+AE Q++GG C F+DAEHALDP  A+ +GV  + LL++QPD GEQAL +VDTL+
Sbjct:    3 KAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTGEQALEIVDTLV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RHOS1 (Protein recA OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=recA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 80/129 (62.02%), Postives = 97/129 (75.19%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K  AL+ AL QI   FGKGSIM LG +     +   STGS  LDIALG GGLPKGR++EIYGPE+SGKTTL LHV+AE Q++GG C F+DAEHALDP  A+ +GV  + LL++QPD GEQAL +VDTL+
Sbjct:   17 KAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTGEQALEIVDTLV 145          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RHOPA (Protein recA OS=Rhodopseudomonas palustris GN=recA PE=3 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 79/129 (61.24%), Postives = 98/129 (75.97%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K  AL  AL QI   FGKGS+M LG++     +  +S+GS  LDIALG GGLPKGR+VEIYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP  A  +GV  ++LL++QPD GEQAL + DTL+
Sbjct:    3 KSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIVEIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHGEQALEIADTLV 131          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_LEGPL (Protein recA OS=Legionella pneumophila (strain Lens) GN=recA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 84/135 (62.22%), Postives = 98/135 (72.59%), Query Frame = 3
Query:  411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            EEN  K   AL  AL QI   FGKGS+M +G S   R +  +STGS  LDIALG GGLPKGR+VEIYGPE+SGKTTL L VIAE Q+ GG   FIDAEHALDPS A+ +GVK + LL++QPD GEQAL + D L+
Sbjct:    2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLV 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_LEGPH (Protein recA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=recA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 84/135 (62.22%), Postives = 98/135 (72.59%), Query Frame = 3
Query:  411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            EEN  K   AL  AL QI   FGKGS+M +G S   R +  +STGS  LDIALG GGLPKGR+VEIYGPE+SGKTTL L VIAE Q+ GG   FIDAEHALDPS A+ +GVK + LL++QPD GEQAL + D L+
Sbjct:    2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLV 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_LEGPC (Protein recA OS=Legionella pneumophila (strain Corby) GN=recA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 84/135 (62.22%), Postives = 98/135 (72.59%), Query Frame = 3
Query:  411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            EEN  K   AL  AL QI   FGKGS+M +G S   R +  +STGS  LDIALG GGLPKGR+VEIYGPE+SGKTTL L VIAE Q+ GG   FIDAEHALDPS A+ +GVK + LL++QPD GEQAL + D L+
Sbjct:    2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLV 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_LEGPA (Protein recA OS=Legionella pneumophila (strain Paris) GN=recA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 84/135 (62.22%), Postives = 98/135 (72.59%), Query Frame = 3
Query:  411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            EEN  K   AL  AL QI   FGKGS+M +G S   R +  +STGS  LDIALG GGLPKGR+VEIYGPE+SGKTTL L VIAE Q+ GG   FIDAEHALDPS A+ +GVK + LL++QPD GEQAL + D L+
Sbjct:    2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLV 133          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_MAGSA (Protein recA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=recA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.837e-40
Identity = 78/135 (57.78%), Postives = 102/135 (75.56%), Query Frame = 3
Query:  411 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            +++   +  AL+ A+ QI  +FGKGSIM LG         VVSTGS  LD+ALG GG+P+GR++E+YGPE+SGKTTLALH+IAEAQ++GG C F+DAEHALDPS A  +GV  + LL++QPD GEQAL + DTL+
Sbjct:   10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPRGRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQPDAGEQALEIADTLV 144          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_RHOCS (Protein recA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=recA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.011e-40
Identity = 81/129 (62.79%), Postives = 95/129 (73.64%), Query Frame = 3
Query:  429 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            K  AL  AL QI  +FGKGSIM LG          +STGS  LDIALG GGLP+GR+VEIYGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP+ A  +GV  + LL++QPD GEQAL + DTL+
Sbjct:   15 KQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAGEQALEIADTLV 143          
BLAST of CX674313 vs. ExPASy Swiss-Prot
Match: RECA_DELAS (Protein recA OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=recA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.011e-40
Identity = 83/131 (63.36%), Postives = 99/131 (75.57%), Query Frame = 3
Query:  423 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLI 815
            S+K  ALQ AL QI   FGKG+IM LG     + + VVSTGS  LDIALG GGLP+GRV+EIYGPE+SGKTTL L VIAE Q+QGG C FIDAEHALD S A+ +GV    +L++QPD GEQAL +VD+L+
Sbjct:   10 SEKAKALQAALAQIEKQFGKGTIMRLGEGEAIQDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKQGGTCAFIDAEHALDTSYAQKLGVNLNEVLISQPDTGEQALEIVDSLV 140          
The following BLAST results are available for this feature:
BLAST of CX674313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RECA_RHOS42.938e-4062.02Protein recA OS=Rhodobacter sphaeroides (strain AT... [more]
RECA_RHOS12.938e-4062.02Protein recA OS=Rhodobacter sphaeroides (strain AT... [more]
RECA_RHOPA2.938e-4061.24Protein recA OS=Rhodopseudomonas palustris GN=recA... [more]
RECA_LEGPL2.938e-4062.22Protein recA OS=Legionella pneumophila (strain Len... [more]
RECA_LEGPH2.938e-4062.22Protein recA OS=Legionella pneumophila subsp. pneu... [more]
RECA_LEGPC2.938e-4062.22Protein recA OS=Legionella pneumophila (strain Cor... [more]
RECA_LEGPA2.938e-4062.22Protein recA OS=Legionella pneumophila (strain Par... [more]
RECA_MAGSA3.837e-4057.78Protein recA OS=Magnetospirillum magneticum (strai... [more]
RECA_RHOCS5.011e-4062.79Protein recA OS=Rhodospirillum centenum (strain AT... [more]
RECA_DELAS5.011e-4063.36Protein recA OS=Delftia acidovorans (strain DSM 14... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5F09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5F09-K17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674313 ID=CX674313; Name=CX674313; organism=Citrus sinensis; type=EST; length=816bp
GTCACATACAGTGTTTCTGTGTGGGAGTGGGGCACTTGAACCAGAGAAAA
TATTAAAATAGTTTCAGTAAAAAGGGACGGAACCCAAAAGTCCAAAACCC
CCAAAACCCTAAGAACATAAACAATAAACACACCACACGTTCAATACTTT
GGTATTAAATGGAATAAATTGTAGTTGTTCACCATTAATTTTTTTGTTGC
CATTTATTTTTGGTTAGTTTTGGTTTGTGAGTCTCCATGGCGAGGCTCCT
TCGAAACGCTTCTTTACTTAGACGCTGTCTTCTCTCAGTCTCACCACCAC
ACCCACATCCACAGAGCTTTAGGGGAGGGATGTTGGAAACTTCTACTCAG
ATTTGCAACTTTTCTTCCAAAAGTAAAAGAAAGTCTAAGTCTGATGGGAG
TGACTCTGGTGAAGAGAATATGTCCAAGAAAGATCTAGCCCTACAACAAG
CATTGGATCAGATTACTAGCTCATTTGGGAAAGGGTCTATTATGTGGCTT
GGTCGGTCTGTCACTCCCAGACATGTTCCCGTTGTGTCCACAGGTTCTTT
TGCACTTGATATAGCACTAGGAACTGGTGGACTTCCAAAGGGACGTGTTG
TTGAGATATATGGTCCTGAGGCTTCTGGGAAAACAACTCTTGCTCTACAT
GTAATTGCTGAAGCACAAAGACAAGGAGGTTACTGTGTTTTTATCGATGC
TGAGCATGCTCTTGATCCATCTCTAGCTGAGACTATTGGAGTAAAGACAG
AGAATTTGCTTCTTGCACAACCTGATTGTGGTGAACAGGCTCTCAGTCTT
GTGGATACGCTGATCC
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